| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3112 |
|---|
| Symbol | ureC |
|---|
| ID | 4902574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 3031725 |
|---|
| End bp | 3033431 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640136338 |
|---|
| Product | urease subunit alpha |
|---|
| Protein accession | YP_001067350 |
|---|
| Protein GI | 126452548 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
|---|
| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAC GTTTGAGCCG CCGCGCGTAC GCGGAAATGT TCGGGCCGAC GACGGGCGAC
CGCATCCGCC TCGCGGACAC CGAGCTGCTG ATCGAAGTCG AGCGCGACCA CACGCTCTAC
GGCGAGGAAG TGAAGTTCGG CGGCGGCAAG GTGATCCGCG ACGGCATGGG CCAATCGCAG
CTCCCCGCGG CCGACGTGGC GGACACCGTG ATCACGAACG CGGTGATTCT CGATCACTGG
GGCATCGTGA AGGCGGACAT CGCGATCAAG CACGGCCGCA TCGCGGCGAT CGGCAAGGCG
GGCAATCCGG ACATCCAGCC GGGCGTGACG ATCGCGATCG GCGCGGCGAC CGAGATCATC
GCGGGCGAAG GCCTGATCGT GACGGCGGGC GGCATCGATA CGCACATCCA CTTCATCAGC
CCGCAGCAGA TCGACGAAGC GCTCGCATCG GGCGTGACGA CGATGATCGG CGGCGGCACG
GGCCCCGCGA CCGGCACCAA CGCGACGACC TGCACGCCGG GGCCGTGGCA CATGGAGCGG
ATGCTGCAGG CGGCCGACGG CTGGCCGATC AATCTCGGCT TTCTCGGCAA GGGCAACGCG
AGCCGGCCGC AGCCGCTCGT CGAGCAGATC GAGGCGGGCG CGATCGGCCT GAAGCTGCAC
GAGGATTGGG GCACGACGCC CGCCGCGATC GACAACTGCC TGACGGTGGC CGACGACACC
GACACGCAGG TCGCGATCCA CACCGATACG CTGAACGAGG CCGGCTTCGT CGAGGCGACG
GTCGCCGCGT TCAAGGGCCG CACGATCCAC ACGTACCACA CCGAGGGCGC GGGCGGCGGC
CATGCGCCCG ACATCCTGAA GGTGTGCGGC GAGGCGAACG TGCTGCCTTC ATCGACGAAC
CCGACGCGCC CGTACACGAT CAACACGCTC GACGAACACC TCGACATGCT GATGGTCTGC
CATCACCTCG ATCCGTCGAT CGCCGAGGAT CTCGCGTTCG CCGAATCGCG GATTCGCCGC
GAGACGATCG CGGCCGAGGA CATCCTGCAC GACCTCGGCG CGCTGTCGAT GCTGTCGTCC
GATTCGCAGG CGATGGGCCG CGTCGGCGAA GTGATCATCC GCACGTGGCA GACCGCGCAC
AAGATGAAGG TGCAGCGCGG CGCGCTCACC GGCGACGGCG CGCGCAACGA CAACTTCCGC
GCGAAGCGCT ACGTCGCGAA ATACACGATC AATCCGGCGC TCACGCACGG CATCGCGCAC
GAGGTCGGCT CGATCGAGCC GGGCAAATGG GCGGACCTCG TGCTGTGGGA GCCCGCGTTC
TTCGGGGTCA AGCCGGCGAT GATCGTCAAG GGCGGCATGA TCGCCGTCGC GCAGATGGGC
GATCCGAATG CGTCGATCCC GACGCCGCAG CCCGTGCATT ACCGCGAGAT GTTCGCCACC
CGCGGCGGCG CGCTCGCGCG CACGTCGCTC ACGTTCGTGT CGCAGCTCGC GCTCGATGCG
GGCATCAGCG CGCGCTACGG GCTCGCGAAG CGGCTCGTGC CGGTGCGCGG CTGCCGCACG
GTGACCAAGC GCGACATGAT CCACAACGCA TGGCAACCGG CCATCCGCGT CGACCCCGAA
ACCTACGACG TCGTCGCCGA CGGCGCGCTG CTCACCTGCG AGCCCGCCGC CGTGCTGCCG
ATGGCGCAAC GCTACTTCCT GTTCTGA
|
|---|
| Protein sequence | MTLRLSRRAY AEMFGPTTGD RIRLADTELL IEVERDHTLY GEEVKFGGGK VIRDGMGQSQ
LPAADVADTV ITNAVILDHW GIVKADIAIK HGRIAAIGKA GNPDIQPGVT IAIGAATEII
AGEGLIVTAG GIDTHIHFIS PQQIDEALAS GVTTMIGGGT GPATGTNATT CTPGPWHMER
MLQAADGWPI NLGFLGKGNA SRPQPLVEQI EAGAIGLKLH EDWGTTPAAI DNCLTVADDT
DTQVAIHTDT LNEAGFVEAT VAAFKGRTIH TYHTEGAGGG HAPDILKVCG EANVLPSSTN
PTRPYTINTL DEHLDMLMVC HHLDPSIAED LAFAESRIRR ETIAAEDILH DLGALSMLSS
DSQAMGRVGE VIIRTWQTAH KMKVQRGALT GDGARNDNFR AKRYVAKYTI NPALTHGIAH
EVGSIEPGKW ADLVLWEPAF FGVKPAMIVK GGMIAVAQMG DPNASIPTPQ PVHYREMFAT
RGGALARTSL TFVSQLALDA GISARYGLAK RLVPVRGCRT VTKRDMIHNA WQPAIRVDPE
TYDVVADGAL LTCEPAAVLP MAQRYFLF
|
|---|
| |