| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2688 |
|---|
| Symbol | ntrC |
|---|
| ID | 4901893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2654114 |
|---|
| End bp | 2655649 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640135915 |
|---|
| Product | nitrogen regulation protein NR(I) |
|---|
| Protein accession | YP_001066940 |
|---|
| Protein GI | 126455410 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.231553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGA TCTGGATAGT AGACGACGAC CAATCGATCC GCTGGGTGCT CGAGAAGGCG
CTCGCGCGCG AGAGCTTCGC GACGCGGAGC TTCGCGAACG TGCGCGACGC GCTCGCCGCG
CTCGACCAGG AAACGCCGCA GGTGCTCGTG TCCGACATCC GGATGCCGGG CGGCTCGGGG
CTCGAGCTGT TGCAGGCGAT GCACGACCGG CTGCCGGGGC TGCCCGTCAT CATCATGACG
GCGTTCTCGG ATCTGGACAG CGCGGTGGCG GCGTTTCAGG GCGGCGCGTT CGAATATCTC
GCGAAGCCGT TCGACGTCGA CAAGGCGGTC GAGCTGATCC GGCGCGCGGT CGAAGAGAGC
CTGCGCGGCG GCGTGCCCGA CGACGACAAG CTCGCCGAGG CGCCCGAGAT GCTCGGCCAG
GCGCCCGCGA TGCAGGACAT GTTCCGCGCG ATCGGCCGGC TGTCGCATTC GGCCGCGACG
GTGCTGATCA CGGGCGAATC GGGCACCGGC AAGGAGCTCG TCGCGCGCGC GCTGCACCGG
CACAGCCCAC GCGCGAACGG CCCGTTCATC GCGCTGAACA CGGCGGCGAT CCCGAAGGAT
CTGCTCGAAT CCGAGCTGTT CGGCCACGAG CGCGGCGCGT TCACGGGCGC GCAGACGACG
CGCCAGGGCC GCTTCGAGCA GGCCGAGAAC GGCACGCTGT TTCTCGACGA GATCGGCGAC
ATGCCGTTCG ATCTGCAAAC GCGCCTGTTG CGCGTGCTGT CGGACGGGCA GTTCTATCGC
GTGGGCGGCC ACAGCCCGCT GCGCGCGAAC GTGCGGGTGA TCGCGGCGAC GCATCAGAAT
CTCGAGGCGC GCGTGCGGCA GGGGCTGTTC CGCGAGGATC TGTATCACCG GCTCAACGTG
ATCCGGCTGC GGCTGCCGCC GCTGCGCGAG CGCAGCGAGG ACATCGCGCT GCTCACGCGT
CACTTCCTGC AGAAGAGCGC GCGCGACCTC GGCGTCGAGC CGAAGCGCGT GTCCGACGAG
GCGCTCGCCT ATCTGACGTC GCTGCCGTTT CCGGGCAACG TCCGGCAGCT CGAGAATCTC
GCGAACTGGC TGACGGTGAT GGCGCCCGCG CAGACGGTCG AGATCAAGGA TCTGCCGCCC
GATCTCGTCG CGACGCAGAC GGCGTCCGGC AGCATGATGC CCGTCGAGGC CACGGTGGAG
GCGGAGGCGC AGGCATCCGG CTTGGGCGTC GGCGCGGCGG AACCGCACGC GCCGAGCGCG
GTCGCGGCCG TGCCGGCGAC GGCGGGCGCG CCCACTGCGG TCGGCGCGCC CGCCGGGCAC
CCGCTGTGGG AGCACGGGTT GCGCACCGAG GTCGCACGCT TGCTGCGCGA GAACTCGGCG
GACGTGATGG ACGCGCTCGC GCGCCGCTTC GAGGCCGCCG TGATTCGCGA GGCGCTCGAT
TTCACGCGCG GCCGCAAGGT CGAGGCGGCG GAGCGGCTCG GCATCGGCCG CAACACGATC
ACGCGCAAGA TTCAGGAGCT GCATCTCGAA TCGTGA
|
|---|
| Protein sequence | MKPIWIVDDD QSIRWVLEKA LARESFATRS FANVRDALAA LDQETPQVLV SDIRMPGGSG
LELLQAMHDR LPGLPVIIMT AFSDLDSAVA AFQGGAFEYL AKPFDVDKAV ELIRRAVEES
LRGGVPDDDK LAEAPEMLGQ APAMQDMFRA IGRLSHSAAT VLITGESGTG KELVARALHR
HSPRANGPFI ALNTAAIPKD LLESELFGHE RGAFTGAQTT RQGRFEQAEN GTLFLDEIGD
MPFDLQTRLL RVLSDGQFYR VGGHSPLRAN VRVIAATHQN LEARVRQGLF REDLYHRLNV
IRLRLPPLRE RSEDIALLTR HFLQKSARDL GVEPKRVSDE ALAYLTSLPF PGNVRQLENL
ANWLTVMAPA QTVEIKDLPP DLVATQTASG SMMPVEATVE AEAQASGLGV GAAEPHAPSA
VAAVPATAGA PTAVGAPAGH PLWEHGLRTE VARLLRENSA DVMDALARRF EAAVIREALD
FTRGRKVEAA ERLGIGRNTI TRKIQELHLE S
|
|---|
| |