| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2604 |
|---|
| Symbol | |
|---|
| ID | 4900450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2567423 |
|---|
| End bp | 2568358 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640135831 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001066857 |
|---|
| Protein GI | 126454106 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.574279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAATCTC AGCAGAAACC GTCCGCGCCG CCTTCCGGCG CGGCCACATC CCGTCCGGCG
CGGACCGCGC GCGGCGGATT CACGTCGACG CGCTTCGTGC TCGTCGAGCC GAGCCACCCC
GGCAACGTCG GCGCGGCGGC GCGCGCGCTG AAGACGATGG GTTTTTCCCG CCTCGTGCTC
GTCGCGCCGC GCGTGCCGCG CGTGCAGAGC GATCCGGAGG CGCTCGCGAT GGCGAGCGGC
GCCGACGATG TGCTCGCGTC CGCGCACGTC GTGCCGACGC TCGCCGACGC GCTGAACGGC
GTGCAGTGGT CGCTCGCGCT CACCGCGCGT TCGCGCGAGT ACGGCCCGCC GCGGCTCGCG
CCCCGCGCGG CCGCCGCGAG CGCGCTTCAG CAGGTGCGCA CGGGCGATAT CGCGCTCGTG
TTCGGCAACG AACGCACCGG CCTGTCGAAC GAGCACGTCG AGCGTTGCAG CGCGATCGCG
CACATTCCGG CGAACCCCGC ATACAGTTCG CTCAACCTCG CGCAGGCGGT GCAGGTGCTC
GCGTACGAGC TGCGCGTCGC GCTGCTCGAA GACGACGAGG CGGCGGTGCC GCCGGACGCC
GCGCTCGGCA CGCTCGCGCA AAGCGACGAG ATCGAGCGGA TGTTCGTCCA TCTGGAAAAT
GCGCTGATCG CGCTCGATTT CCTCGATCCG CGCAATCCGA AGAAGCTGAT GCCGCGGCTG
CGGCGGCTCT TCGCGCGAAC GGGGCTCGAA CGCGAAGAAG TGAATATCGT TCGAGGCATC
GCGAAGCACA TCCTGCTGAA GGCGGGCGGG GCGAACGCGC GCGCGGGCGC TTCGGGCGAG
GGCAACGGCA ACGGCAACGG CAACGGCAAC GGCAACGGCG AAAGCGCCAC CGGCGACGCG
GACTATTCGG GTCGCGACGT CAGCCGAGAC GACTGA
|
|---|
| Protein sequence | MESQQKPSAP PSGAATSRPA RTARGGFTST RFVLVEPSHP GNVGAAARAL KTMGFSRLVL
VAPRVPRVQS DPEALAMASG ADDVLASAHV VPTLADALNG VQWSLALTAR SREYGPPRLA
PRAAAASALQ QVRTGDIALV FGNERTGLSN EHVERCSAIA HIPANPAYSS LNLAQAVQVL
AYELRVALLE DDEAAVPPDA ALGTLAQSDE IERMFVHLEN ALIALDFLDP RNPKKLMPRL
RRLFARTGLE REEVNIVRGI AKHILLKAGG ANARAGASGE GNGNGNGNGN GNGESATGDA
DYSGRDVSRD D
|
|---|
| |