Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_2544 |
Symbol | |
ID | 4903034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 2497061 |
End bp | 2498710 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640135771 |
Product | peptide/opine/nickel uptake ABC transporter ATP-binding protein |
Protein accession | YP_001066798 |
Protein GI | 126452152 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.303665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CGCAGATCGC GCGCGGCGCC GGCGCGCCGC CGTCGCCGTC GACGCCGCCG CATGAGCCGT TGCTGTCGAT CGAGCGGCTG CGCGTGCGCT TCGGCGGCAC GCTCGCCGTC GACGACGTAT CGCTTGCGAT CGGCCGCGGC GAGCGCGTCG CGCTCGTCGG CGAATCGGGC TCCGGCAAGA GCGTCACCGC GCTGGCGATC CTGCGCCTGC TGCGCGACGC CGACGTGAGC GGCGCGATCC GCTTCGCGGG CGAGACGCTC GCCGACAAGA GCGAGCGCGA GATGCGCGCG CTGCGCGGCG CGGACATCGC GATGATCTTC CAGGAGCCGA TGACCGCGCT CAATCCGCTC TTCACGATCG GCGAGCAGAT CGGCGAGACG ATCGAGCTGC ACGATGGCGT ATCGAAGCGC GACGCGCGCG CGCGGGCGAT CGCGCTGCTC GCGCGCACCG GGATCGACCG GCCGGACGAG CGCGTCGACA GCTATCCGCA CCAGTTGTCG GGCGGCCAGC GGCAGCGCGC GATGATCGCG ATGGCGCTCG CATGCCGGCC GCGCCTGTTG CTCGCCGACG AGCCGACCAC CGCGCTCGAC GTGACGATCC GCGCGCAGAT CGTCGAGCTG CTGCTCGAAC TGCAGCGTGA CGCGGCGGCC GAGCGCGGGA TGGCGGTGCT GCTCATCACG CACGATCTGA ATCTCGTGCG GCGCTTCGCC GAGCGGGTCG CGGTGATGGA GAAGGGCCGG CTCGTCGAGT GCGGGCCGGT CGAGCGGATC TTCGATGCGC CCGAGCACCC GTACACGCAG CGCCTGTTGC ACAGCCGGCC GCAGCGCACG GTGTCGCCCG TGTTGCCGAT CGCGCCCGTC GTGCTCGACG CGCGCGGGGT CACCGTGCAG TTCAGGCAGA AGCTGCCGGG CTTCGCGGGC TGGCTCCGCT CGGGGCGCTT CACCGCGGTG TCGGACGCGA GCGTGTCGGT GCGGCAGGGC GAGACGCTCG GCATCGTCGG CGAATCGGGC TCCGGCAAGT CGACACTCGC GATGGCGCTC CTCGGGCTGC AGCGGGTCGC GCACGGCGAC ATCGAATTCG AGGGCCGTTC GCTCGCGAGC TTTCGCGGGC GCGAGCGCGT CGCGCTGCGC GCGAACATGC AGGTGGTATT TCAGGATCCC TTCAGCTCGC TTTCGCCGCG GCAGACGATC GGGCGGATCG TGTCCGAAGG GCTCGAACTG CATCGCCCTC GGCTCACGGC CGACGCGCGC CGCGACAAGG TGATCGCGGT GCTGCGCGAA GTCGGCCTCG ATCGGACGGT GCTGCATCGC TATCCGCACG AGTTCTCGGG CGGCCAGCGC CAGCGGATCG CGATCGCGCG CGCGCTCGTG CTGGAGCCGC GCGTGCTCGT GCTCGACGAG CCGACGAGCG CGCTCGACGT GTCGATCCAA CAACAAGTGT TGAAGCTGCT GTCGAATCTG CAACGAAAGT ACAACCTGGG CTACGTGTTC ATCAGCCACG ATCTGGAGGT GATCGGCGCG ATGGCGCACC GGGTGGCGGT GATGCAGGGC GGGGCGATCG TCGAGACGGG CGACGTCGAG CGCATCTTCA CCGAACCGGT GCATCCTTAC ACGCAAAAAT TGCTGAAAGC CGTTCGTTAA
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Protein sequence | MSAAQIARGA GAPPSPSTPP HEPLLSIERL RVRFGGTLAV DDVSLAIGRG ERVALVGESG SGKSVTALAI LRLLRDADVS GAIRFAGETL ADKSEREMRA LRGADIAMIF QEPMTALNPL FTIGEQIGET IELHDGVSKR DARARAIALL ARTGIDRPDE RVDSYPHQLS GGQRQRAMIA MALACRPRLL LADEPTTALD VTIRAQIVEL LLELQRDAAA ERGMAVLLIT HDLNLVRRFA ERVAVMEKGR LVECGPVERI FDAPEHPYTQ RLLHSRPQRT VSPVLPIAPV VLDARGVTVQ FRQKLPGFAG WLRSGRFTAV SDASVSVRQG ETLGIVGESG SGKSTLAMAL LGLQRVAHGD IEFEGRSLAS FRGRERVALR ANMQVVFQDP FSSLSPRQTI GRIVSEGLEL HRPRLTADAR RDKVIAVLRE VGLDRTVLHR YPHEFSGGQR QRIAIARALV LEPRVLVLDE PTSALDVSIQ QQVLKLLSNL QRKYNLGYVF ISHDLEVIGA MAHRVAVMQG GAIVETGDVE RIFTEPVHPY TQKLLKAVR
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