Gene BURPS1106A_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_2279 
Symbol 
ID4899930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp2264837 
End bp2265733 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID640135508 
Productpolysaccharide deacetylase family protein 
Protein accessionYP_001066543 
Protein GI126453270 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTCGCA TCGTCCTCAA GATCGACGTC GACACGTTGC GCGGCACGCG CGAAGGCGTG 
CCGAACCTCG CGCGCATCTT CGATCGCTTC GCCGCGCGCG CGACCTTCCT CTTCAGCCTC
GGCCCCGATC ACACCGGCTG GGCGATGCGC CGCGTGCTGC GTCCCGGGTT CCTGAAGAAG
GTGTCGCGCA CGTCGGTCGT CGAACATTAC GGCGTCAGGC AACTGCTGTA CGGCGTGCTG
CTGCCCGGCC CCGACATCGG CCGCCGCGCG AGAGCCGACA TGCGCGCGAT CCACGAAGCC
GGCTTCGAAT GCGGCATCCA CACGTGGGAT CACGTGTACT GGCAGGACAA CGTCCGCCGG
CGCCCGCGCG AGTGGACCGT GCGCGAGATG AACAAGAGCC GCGAGCGCTT CGTCGAGATC
TTCGGCGCGC CGCCCGTCAC GCACGGCGCG GCCGGCTGGC AGATGAACGA CGCGGCGTTC
GAGCAGATCG ACGCGTGGGG GATGCGCTAC GCATCGGACG GCCGCGGCCA TTCGCCGTAT
CTGCCCGTCG TCGCGGGCAA AACGCTCGCG CACGTGCAGA TGCCGACCAC GCTGCCGACG
CTCGACGAGA TCCTCGGCGT GGACGGCATC GATACGGGCA ACGTCGCCGC GCGTGTGCTC
GAGCATACCG AGCGCAATCC GCACGACCAG GTGTTCACGC TGCACGCGGA GCTCGAAGGC
CAGAAGCTCG CGCCGGTGTT CGAGCAACTG CTCGCGGGCT GGCGCGCGCA AGGCCACACG
TTCGCGACGA TGGGCGACTA TTACGCGACG CTGGACCGCG CCGCGCTGCC ATCGTACCCT
GTCGCGTGGG GCGAAATCCC CGGCCGCTCC GGCGAGCTGA TCGTCCAGCC CGACTGA
 
Protein sequence
MARIVLKIDV DTLRGTREGV PNLARIFDRF AARATFLFSL GPDHTGWAMR RVLRPGFLKK 
VSRTSVVEHY GVRQLLYGVL LPGPDIGRRA RADMRAIHEA GFECGIHTWD HVYWQDNVRR
RPREWTVREM NKSRERFVEI FGAPPVTHGA AGWQMNDAAF EQIDAWGMRY ASDGRGHSPY
LPVVAGKTLA HVQMPTTLPT LDEILGVDGI DTGNVAARVL EHTERNPHDQ VFTLHAELEG
QKLAPVFEQL LAGWRAQGHT FATMGDYYAT LDRAALPSYP VAWGEIPGRS GELIVQPD