| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1931 |
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| Symbol | |
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| ID | 4900787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1883135 |
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| End bp | 1883848 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640135161 |
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| Product | extracytoplasmic-function sigma-70 factor |
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| Protein accession | YP_001066196 |
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| Protein GI | 126452200 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.385484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGAAG TGCTCGCTCG GCCGGCGCCG GCAAAACCGT TACCGATCCT CGCTTCGAAC
GGGGCGTTTG CACCCGCCGC CGCGCCCGTC TTGCGCGCGC CGTCGCGGCC TGCGGCGCGC
ACGCCGGGCG CGCGCGAGCA CGGCGCGCTC GTCGATGTGC TGGTCGCGAA CCGGCCGATG
CTCGTCAAGC TCGCGCGCGG CTTCGTCGGC TGCGCGAGCC GCGCGGAGGA CGTGGTGCAC
GACGTGTTCG TGAAGCTCGT CGATTTTCCG AACCAGGACG CGATCCGGCA GCCCGTCGCG
TACGTGACGC GGATGGTTCG CAACGCGTCG ATCGACGCGT GCCGCCGCCA GACGCTCGAG
AACACCTACC ACGCGGACGA GGACGACGGC CTCGACGTGC CGTCGCCCGA GCTGTCGCCG
GAGGCCGCGC TCGTCGTGCG CGACACGCTG CGCCACGTGT ACGACGCGCT CGCGCAACTG
CCCGCGCGCA GCCGCGCCGC GTTCGAGATG GTGCGGCTGC GCGAGGAGAC GCTGCAGAGC
GCCGCGCGCG CGCTGAACGT GTCGCAGACG CTCGTGCACT TCATGGTCCG CGACGCCGAG
CGGCACTGCG TCGCGTGCGT CGACGCGTCC GAGCGCGGGC TCGCGTGCCC GGCGTTTTGC
GGCGCCCGCG CGCGGACGGT AAAAAAATGC GTGCGCGATT CGTCTATCGA GTAG
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| Protein sequence | MAEVLARPAP AKPLPILASN GAFAPAAAPV LRAPSRPAAR TPGAREHGAL VDVLVANRPM
LVKLARGFVG CASRAEDVVH DVFVKLVDFP NQDAIRQPVA YVTRMVRNAS IDACRRQTLE
NTYHADEDDG LDVPSPELSP EAALVVRDTL RHVYDALAQL PARSRAAFEM VRLREETLQS
AARALNVSQT LVHFMVRDAE RHCVACVDAS ERGLACPAFC GARARTVKKC VRDSSIE
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