| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1728 |
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| Symbol | |
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| ID | 4899653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1686197 |
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| End bp | 1687297 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640134958 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_001065999 |
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| Protein GI | 126451454 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.169494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCA ACATGTCCGA CGCGGCCGGC GCACCGGCCA CTTCATTCGC GCCCGAGCGG
CGCGCGTTCC TGGCCCGTGC GGGCGGCGGG CTCGGCCTCG CGGCGGCCGG GCTCGCGCTC
GGCGCGGCAG CGGCGCCGGG CCGGGCGCTC GCGGCCGGCG CCACGGCCAC CGCCGATACC
GGCGCGGCGT CACCCGCCGG CGGCTCGCCG CGGCGCTCCC CCGCCGACGA ACCCGAGACG
GCGCACGGCG CGTTCTGGCC GAACGGCGCG CGGCTCGTGA TCTCGATCTC GATGCAGTTC
GAGGCGGGCG GCCAGCCGCC GACGGGCGCC GACGGCCCGT TCCCGCCCGT CGTCTTTCCG
CCGCAGGTGC CCGTCGATCT CGCGTCCGCG ACGTGGTTCG CCTACGGCTA TCGCGAAGGC
ATCCCGCGCA TGCTCGATTT GTGGGACCGG CACGGCGTGA AGGTCACCTC GCACATGATC
GGCGAGGCCG TGCACCGCCG GCCGGATCTC GCCCGAGAGA TCGTCGCGCG CGGCCACGAG
GCGGCCGGAC ACGGGCCGCG CTGGAGCGCG CAGTACGCAC TCCCCCGCGA CGAAGAGCGG
CGCTTCCTGA TCGCCGCCCG CGAGATGGTC GAAACCGCGA CGGGCGCGCG GCCCGTCGGC
TACAACTGCA ACTGGCTCAG ACGCGGGCCG AACACACTGC CGCTGCTGCA GGAGCTCGGC
TATCTGTACC ACATCGACGA CGTGAGCCGC GACGAGCCGT TCATCGAGCA GGTGAACGGC
CAGGATTTCG TCGTCGTGCC CTACACGCTG CGCAACAACG ACATCCTGCT GATCGAAGGT
CGCAACTATT CGCCCGGGCA ATTCCTCGAG CAGATCAAGC TCGACTTCGA TCAGTTGTAC
GACGAAGCCG CCACGCGGCG GCGCATGATG TCGATCAGCG CGCACGACCG GATCAGCGGC
ACGCCGCAGA TGGTGCGCGC GTGGGACGCG TTCCTGCGCT ACGCGCAATC GCATCCGGGC
GTCGCGTTCA TGCGCAAGGA CGACATCGCC CGCCATGCAC GGCGTAGCCC GCTCACGCTG
CGCGAACCCG AAACCCTCTG A
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| Protein sequence | MTTNMSDAAG APATSFAPER RAFLARAGGG LGLAAAGLAL GAAAAPGRAL AAGATATADT
GAASPAGGSP RRSPADEPET AHGAFWPNGA RLVISISMQF EAGGQPPTGA DGPFPPVVFP
PQVPVDLASA TWFAYGYREG IPRMLDLWDR HGVKVTSHMI GEAVHRRPDL AREIVARGHE
AAGHGPRWSA QYALPRDEER RFLIAAREMV ETATGARPVG YNCNWLRRGP NTLPLLQELG
YLYHIDDVSR DEPFIEQVNG QDFVVVPYTL RNNDILLIEG RNYSPGQFLE QIKLDFDQLY
DEAATRRRMM SISAHDRISG TPQMVRAWDA FLRYAQSHPG VAFMRKDDIA RHARRSPLTL
REPETL
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