| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1664 |
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| Symbol | |
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| ID | 4902450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1617844 |
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| End bp | 1619400 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640134893 |
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| Product | peptidase s1, chymotrypsin:pdz/dhr/glgf |
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| Protein accession | YP_001065934 |
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| Protein GI | 126455207 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.442424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTCATC AAACGCTTGG CCGCGCCCTG ATTCACGTTG CAGCGCTCGG GGCGGTGCTT
GTCGGCTTCG CTTGCCTGCA GCCGACGCCA CTCGCCGCGG GTACGCTGCA ATCGCCGGCG
AAGGCGAAGC GAATCGCGCA GATCGGCGCC GCGGGGCCGG TCGATTTTCC CACGCTCGTC
GAGCGATACG GGCCCGCCGT CGTCAGCGTG AGCGTGCCTG CGCAGGATCC GCAGATGTCG
GCGTCCGGCC TCGAGGCGCT CGATCCCGAC GATCCGTTCT TCGCCTACTT CAAATCCGCC
GCCACGCAGC CCGCGCTGTC GCCGGAGAAC GGGCCGCGCG CGATGGCGGG CGCCGGATCC
GGTTTTATCG TCGGCGCCGA CGGGATCATC CTGACGACCG CGTACGTGGT CGGGCAGGCG
AGCGAGGCGA CGGTTCGCCT GATCGACCGG CGCGAATTCA AGGCGCGGGT GCTGGCCGTC
GATGATTCGA GCGATGTGGC CGTGTTGCAG ATCGACGCGA CGAAGCTGCC GACGGTGCGG
CTCGGCGATT CGTCCCGGGT GCGCACGGGC GAGCCGGTGC TGACGATCGG CACGCCGGAC
GGCTCGGCGA ACACGGTGAC GACGGGCATC GTCAGCGCGA CGGCGCGCAT GTTGCCCGAC
GGCGGCCGCT TTCCGTTCTT TCAGACCGAC GTGACCGGCA ACCTCGACAA CTCGGGCGGC
CCGGTGTTCA ACCGCGCGGG CGAGGTGATC GGCATCGATG TGCAGATCTA CGGCAGCGGC
GAGCGCAATC CGGGCGTGAC GTTTGCGATT CCGATCGACA TGGCGATGAA GGTGCGTGCG
CAGGTGCTGC AGGCGCAGCG CCAGGCGCGG CAGCAGGCGC AGCCGCCGAT GCAACAGGCG
CAACAGGCGC AACAAGCGCC GCCCGCGGCG GCGCAGAACG CGCTGGGCGT CGACGCGCAG
GACGTCGGTC CGGGGCTCGC GGCGGCGTTC GGCCTGCCGC GGCCGGCGGG CGCGCTTGTC
AATGCGGTGG AGCCGGGGTC GCCGGCGGCG GCGGTCGGGC TGAAGCCGGG CGACGTGATC
GTGCAGATCG GCGATCGGCC GCTCGGCCGC TCGGCGGAAC TGGCCGGCGA CCTCGCGGCG
CTGCCGCCCG GGGCGAGCGC GCCGATCACG CTGATCCGCA ACCGGATGCC GATGACGGTG
ATGCTCGGCT CCGGCGCGGC CGCGAGCGCG CCGACAGGCG CGACCGCATC GCCGGGCAAT
GCGGCCGCCG GCCGCAGCGA GACGGGCGGC GCGGACCGCC TGGGCCTGAC GATGCATCCG
CTGACGGACG ACGAGCGGCG CTCGACGGGA TTGCCCGTCG GCATGGTGGT CGATGCGGTG
CGCGGGCCGG CGGCGAACGC GGGGATTCGG CCGGGCGACG TCGTGCTGGA GCTCGACGAT
ACGCTGATCG AGACGCCGGA CATGGTGCCG GCGCTGGAGG CGAAGGCGGG GAAGGTGGTC
GCGGTGCTGA TTCAGCGGGG GAGCGAGCGC AGGTTCGTGT CGGTGAAGGC GCGGTGA
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| Protein sequence | MSHQTLGRAL IHVAALGAVL VGFACLQPTP LAAGTLQSPA KAKRIAQIGA AGPVDFPTLV
ERYGPAVVSV SVPAQDPQMS ASGLEALDPD DPFFAYFKSA ATQPALSPEN GPRAMAGAGS
GFIVGADGII LTTAYVVGQA SEATVRLIDR REFKARVLAV DDSSDVAVLQ IDATKLPTVR
LGDSSRVRTG EPVLTIGTPD GSANTVTTGI VSATARMLPD GGRFPFFQTD VTGNLDNSGG
PVFNRAGEVI GIDVQIYGSG ERNPGVTFAI PIDMAMKVRA QVLQAQRQAR QQAQPPMQQA
QQAQQAPPAA AQNALGVDAQ DVGPGLAAAF GLPRPAGALV NAVEPGSPAA AVGLKPGDVI
VQIGDRPLGR SAELAGDLAA LPPGASAPIT LIRNRMPMTV MLGSGAAASA PTGATASPGN
AAAGRSETGG ADRLGLTMHP LTDDERRSTG LPVGMVVDAV RGPAANAGIR PGDVVLELDD
TLIETPDMVP ALEAKAGKVV AVLIQRGSER RFVSVKAR
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