| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1482 |
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| Symbol | mdcA |
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| ID | 4899210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1438086 |
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| End bp | 1439732 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640134712 |
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| Product | malonate decarboxylase, alpha subunit |
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| Protein accession | YP_001065755 |
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| Protein GI | 126451719 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.723185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGAT GGAACGAGGC CCGCGCCGCG CGAGCGGCGC GCCTCGCCGC CGCCGCGCCG
CTCGCGCGGG GCAAGCGGGT GGCCGCGCGC GATGCGACCG CGCTGCTCGA AGCGGTGCTG
CGGCCGGGCG AGCGCGTCTG CATCGAAGGC GACAACCAGA AGCAGGCGGA CCTGCTCGCC
GCGGCGCTCG CCGCCGTCGA CAGCGCGAAG GTGCACGGCC TGCACATGGT GCAATCGGGC
GTCGTGCTGC CCGAGCATCT CGACGTGTTC GAGCGCGGCA TCGCGAAGCG GCTCGACTAC
GCATACTCGG GCCCGCAATC GCAGCGGATC GCGAAGCTGC TGTTCGGCGG CGGCATCGAG
CTCGGCGCGG TGCACACGTA TCTCGAGCTC TTCGCGCGCT ACTTCATCGA TCTGACGCCG
CACGTCGCGC TCATCGCCGC GGTGAGCGCC GACGCCGACG GCAACCTGTA CACCGGCCCG
AACACCGAGG ACACGCCGAC CGTCGTCGAG GCGACCGCGT TCAAGGACGG CATCGTGATC
GCGCAGGTCG AGAAGATCGT CGAGCGCGTG CCGCGCGTCG ACATCCCGGG CGATCGCGTG
CACTTCGTCG TCGAGGCGGG GCGGCCGTTC TACGTCGAGC CGCTGTTCAC GCGCGACCCG
GCGGGCATCA CCGAGACGCA GATCCTCACC GCGATGCTCG CGATCAAGGG CATCTACGCG
CGCTACGGCG TGAAGCGGCT CAATCACGGG ATCGGCTTCA ACACGGCGGC GATCGAGCTG
CTGCTGCCGA CCTACGGCGA GCGGCTCGGC CTGAAAGGGC AGGTCTGCAC GCACTGGGCG
CTGAACCCGC ATCCGACGCT CATCCCCGCG ATCGAATCCG GCTGGGTCGA GCAGATCCAT
TGCTTCGGCT CCGAAGTGGG GATGGACGAC TACATCCGCG CGCGCTCGGA CATCTTCTTC
ACGGGCGCCG ACGGCTCGCT GCGCTCGAAC CGCGCGTTCT GCCAGACGGC GGGCCTCTAT
GCATGCGACC TGTTCATCGG CTCGACGCTG CAGATCGATC TCGCCGGCCA CTCGTCGACG
GTGACGGCCG GGCGGATCGC GGGCTTCGGC GGCGCGCCGA ACATGGGCAG CGACGCGCGC
GGCCGGCGCC ACCCGAGCGA GCCGTGGCTC AAGGCGGGCG AGGAGGCCGA TGCGCGAACG
CCCGCGGCGC TGCGGCGCGG GCGCAAGCTC GTCGTGCAGA TCGGCGAGAC GTTCGGCGAG
AAGAACGCGC CGATGTTCGT CGAGCAGCTC GACGCGCTGC GCCTCGCCGA TAAACTCGCG
CTCGATCTCG CGCCCGTGAT GGTGTACGGC GACGACGTCA CGCACGTCGT CACCGAGGAA
GGGATCGCGA ACCTGCTGAT GTGCCGCGAC GCCGACGAGC GCGAGCACGC GATTCGCGGC
GTGGCTGGCT ACACGGAGAT CGGCCGCGGC CGCGATCGCC GGCTCGTCGA GCGGCTGCGC
GAGCGCGGCG TGATCCGGCG CCCCGAGGAT CTCGGCATCG ATGCGCTCGA CGCCGACCGG
CGGCTGCTCG CCGCGCGCTC GATCAAGGAT CTCGTGCATT GGTCGGAGGG CCTCTACGCG
CCGCCCGCCC GATTCCGCAA TTGGTGA
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| Protein sequence | MTGWNEARAA RAARLAAAAP LARGKRVAAR DATALLEAVL RPGERVCIEG DNQKQADLLA
AALAAVDSAK VHGLHMVQSG VVLPEHLDVF ERGIAKRLDY AYSGPQSQRI AKLLFGGGIE
LGAVHTYLEL FARYFIDLTP HVALIAAVSA DADGNLYTGP NTEDTPTVVE ATAFKDGIVI
AQVEKIVERV PRVDIPGDRV HFVVEAGRPF YVEPLFTRDP AGITETQILT AMLAIKGIYA
RYGVKRLNHG IGFNTAAIEL LLPTYGERLG LKGQVCTHWA LNPHPTLIPA IESGWVEQIH
CFGSEVGMDD YIRARSDIFF TGADGSLRSN RAFCQTAGLY ACDLFIGSTL QIDLAGHSST
VTAGRIAGFG GAPNMGSDAR GRRHPSEPWL KAGEEADART PAALRRGRKL VVQIGETFGE
KNAPMFVEQL DALRLADKLA LDLAPVMVYG DDVTHVVTEE GIANLLMCRD ADEREHAIRG
VAGYTEIGRG RDRRLVERLR ERGVIRRPED LGIDALDADR RLLAARSIKD LVHWSEGLYA
PPARFRNW
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