Gene BURPS1106A_1168 details

Gene Information

• Locus tag: BURPS1106A_1168
• Symbol: ubiC
• ID: 4899765
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 1149498
• End bp: 1150100
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 640134398
• Product: chorismate--pyruvate lyase
• Protein accession: YP_001065447
• Protein GI: 126452801
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGGA TGCGTTTCGA CGCCGCCGAT GCGCACTGGC GCGAGACGCC GCGCCCCGGC 
GCGTCGAGCG CGCAGAAGGA CTGGCTCACG CGCGGCGGCT CGCTCACCGC GCACCTCGCG 
CGGCTCGGCC GCGTGACGGT GCGCGTGACG CGCGAGACGG TCGCGGCGCC GTGGGCCGAC 
GAGCATCGCG CGCTTTCCTG CGCGTCGCGC GCGCCGGTGT GGGTGCGCGA GGTCGTGCTC 
GCGGTCGACG GCGCGCCGTT CGTCGCCGCG CACAGCATCG CGCCGCTCGC CGCGAGCAAG 
GGCGTGTGGC AGGCGATGCG GCGGCTGCGC ACGCGCCCGC TCGCCGAGCT GCTCTATAGC 
GATCCGGAAG TGACGCGCTC GGCGCTCGTG AGCCGGCGCG TGCTCGCCGG GCATCCGTTG 
TTCTCGCTCG CATCGCTCGC GCTCGCGCGC GCGCATGCGA CGGAGCACGC GTTCGCCGCA 
CGCCGCTCGG TGTTCGAGCG GCGCGGCACG CCGCTGATGG TGACCGAATG CATGCTGCCC 
GCGCTGTGGC GGCATCTCGA CGCACACGGC GAGCGCCGCG CGCGCGGCCT CGAGCAGACG 
TGA 

 

Protein sequence

MARMRFDAAD AHWRETPRPG ASSAQKDWLT RGGSLTAHLA RLGRVTVRVT RETVAAPWAD 
EHRALSCASR APVWVREVVL AVDGAPFVAA HSIAPLAASK GVWQAMRRLR TRPLAELLYS 
DPEVTRSALV SRRVLAGHPL FSLASLALAR AHATEHAFAA RRSVFERRGT PLMVTECMLP 
ALWRHLDAHG ERRARGLEQT