| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0727 |
|---|
| Symbol | |
|---|
| ID | 4902092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 705426 |
|---|
| End bp | 706598 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640133957 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001065009 |
|---|
| Protein GI | 126453727 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTAC CGTTACTCGC GCTCGCGATC AGCGCGTTCG CCATCGGCAC CACCGAGTTC
GTCATCATGG GCCTGTTGCC CGACATCGCG CGCGAGCTCG CCGTCACGCT GCCGTCCGCC
GGCCTTCTCG TGAGCGGCTA CGCGCTCGGC GTCGCCGCGG GCGCGCCGCT GCTCGCCGTG
CTGACGAGCC GCATGCCGCG CAAGGTCGCG TTGCAGCTGC TGATGGCGAT CTTCATCGCC
GGCAACGTGC TGTGCGCGCT CGCGCAGAGC TACGGGATGC TGATGGTCGC GCGCGTCGTC
ACGTCGTTCG CGCACGGTTC GTTTTTCGGC ATCGGCGCGG TGGTCGCCGC ATCGCTCGTG
AGCGCCGACA AGCGCGCGAG CGCGATCGCG CTGATGTTCA CGGGGCTCAC GCTCGCGAAC
GTGCTCGGCG TGCCGTTCGG TACCTTCGTC GGCCAGACGC TCGGCTGGCG CGCGACGTTC
TGGATCGTCG CGGCGCTCGG TGTCGCGTCG TTCGCCGGCG TCGCCGCGCT CGTGCCGAAA
CGGCGCGACG CGGCGGGCGC GGCGCTTAGC CGCGAGCTGC GCGTGCTCAG GCAGCCGCAG
GTGTGGCTCG CGCTCGCGAT GACGGTGCTC GGTTTCGGCG GCGTATTCGT CGTGTTCACC
TACATCGCGC CGATTCTCGA GGATGTGACG GGCTTCGCGC CGCGTGCGGT GTCGCTCGTG
CTCGTGCTGT TCGGCGCCGG GCTCACGATC GGCAACACGA TCGGCGGCCG GCTCGCGGAC
CGCGCGCTGA TGCCTTCGCT GGTCGCGATT CTCGTCGCGC TGATCGCCGT GATGGCGGCG
TTCGCGAAGA CGAGCCACAT GCCCGCCGCG GCCGCCGTCA CCGTATTTGT CTGGGGGATC
GCTGCTTTTG CGACGGTTCC TCCGCTACAG TCGCGGGTCG TCGAGAAGGC CGCGCATGCG
CCGAATCTCG CGTCGACGCT GAACATCGGG GCGTTCAACG TCGGCAATGC GGGCGGCGCG
TGGCTGGGCG GCGTCGCGCT GTCGCACGGG GTGCCGCTCG ACGCGCTGCC TTGGGTGGCG
GCCGTCGTCA CGCTCGCCGC GCTCGCCGTC ACGGCGCTCG CCGCGCGGCT CGATACGCGC
GTCTCATCGG GCGCGGCTAC AGCGGCGCAA TGA
|
|---|
| Protein sequence | MPLPLLALAI SAFAIGTTEF VIMGLLPDIA RELAVTLPSA GLLVSGYALG VAAGAPLLAV
LTSRMPRKVA LQLLMAIFIA GNVLCALAQS YGMLMVARVV TSFAHGSFFG IGAVVAASLV
SADKRASAIA LMFTGLTLAN VLGVPFGTFV GQTLGWRATF WIVAALGVAS FAGVAALVPK
RRDAAGAALS RELRVLRQPQ VWLALAMTVL GFGGVFVVFT YIAPILEDVT GFAPRAVSLV
LVLFGAGLTI GNTIGGRLAD RALMPSLVAI LVALIAVMAA FAKTSHMPAA AAVTVFVWGI
AAFATVPPLQ SRVVEKAAHA PNLASTLNIG AFNVGNAGGA WLGGVALSHG VPLDALPWVA
AVVTLAALAV TALAARLDTR VSSGAATAAQ
|
|---|
| |