Gene BURPS1106A_0572 details

Gene Information

• Locus tag: BURPS1106A_0572
• Symbol: nirD
• ID: 4903075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: -
• Start bp: 544242
• End bp: 544700
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640133802
• Product: nitrite reductase [NAD(P)H], small subunit
• Protein accession: YP_001064855
• Protein GI: 126453013
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.237046
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGACG CGTCGCGCAT CGCGCCGCAC GCGCACCCCG TCAATCACCC AGGAATCCGA 
ATCATGTCCG CCACCCAACC CGAATGGATC GCCGTCTGCC GACTGGACGA CATCCCGCCG 
CTCGGCGCAC GCGTCCTCAC GCGCGAGGCC GGCACGCCGA TCGCCCTCTT TCGCACCGCG 
AGCGACGCGG TGTTCGCGCT CCTCGACCGC TGCCCGCACA AGGGCGGCCC GCTGTCGCAG 
GGGATCGTTC ACGGCGAGCA GGTCACGTGT CCGCTGCACG GCTTCAATGT CGCGTTCTCG 
AGCGGCTGCG CGCTGCCGCC CGACGAAGGC TGCACGAGCG TCTTCAGCGT GAAGCGCGAC 
GGCGACACGG TGCTGCTCGA GCGCACCGAG CTCGCGACGC TCGGCGTCGA CGACGCGGCG 
CAGCCGGCTG CGCTCGCATC GCCGGGCGCA GCCGCATGA 

 

Protein sequence

MRDASRIAPH AHPVNHPGIR IMSATQPEWI AVCRLDDIPP LGARVLTREA GTPIALFRTA 
SDAVFALLDR CPHKGGPLSQ GIVHGEQVTC PLHGFNVAFS SGCALPPDEG CTSVFSVKRD 
GDTVLLERTE LATLGVDDAA QPAALASPGA AA