Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_0563 |
Symbol | rpoH |
ID | 4901652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 534257 |
End bp | 535192 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640133793 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_001064846 |
Protein GI | 126453430 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAACG CATTGACCCT TCCGAACACA CTGCGCCCGG CGTCCGCTAA GGCCGTATCG GCGGGCTCGC TGACGCTCGC CTCTCATTCG ATGCTGCCCG GCCATCTGGG CAACATCGAC GCCTATATCC AGGCTGTGAA CCGGATTCCG CTGCTAAGCG CGGAGGAAGA GCGTCAATAC GCGACCGAAT ACCGCGAGCA AAACAATCTC GACGCCGCGC GCCGGCTCGT GCTGTCGCAC CTGCGGCTCG TCGTGTCGGT CGCGCGCAAC TACCTCGGCT ACGGCCTGCC GCACGGCGAT CTGATCCAGG AAGGCAACAT CGGCCTGATG AAGGCGGTCA AGCGGTTCGA TCCCGCCCAG AACGTGCGCC TCGTGTCGTA CGCGATCCAC TGGATCAAGG CCGAGATTCA CGAGTACATC CTGCGCAACT GGCGCATGGT CAAGGTGGCG ACGACGAAGG CGCAGCGCAA GCTGTTCTTC AATCTGCGCA GCCACAAGAA GGGCACGCAG GCGTTCACGC CGGAGGAAAT CGACGGCCTC GCGCAGGAGC TGAACGTCAA GCGCGAGGAA GTGGCCGAGA TGGAAACCCG CCTGTCGGGC GGCGACATCG CGCTCGAAGG CCAGATCGAC GACGGCGAGG AATCGTACGC GCCGATCGCC TATCTCGCCG ATTCGCACAA CGAGCCGACC GCCGTGCTCG CCGCGCGGCA GCGCGACATG CTGCAGACGG ACGGCATCGC GCGCGCGCTC GAATCGCTCG ACGCACGCAG CCGCCGGATC ATCGAGGCGC GCTGGCTGAA CGTCGACGAC GACGGCTCGG GCGGCTCGAC GCTGCACGAT CTCGCGGCCG AATTCGGCGT GTCGGCGGAG CGCATCCGCC AGATCGAGGC AAGCGCGATG AAGAAGATGC GCACGGCGCT CGCCGCGTAC GCATAA
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Protein sequence | MSNALTLPNT LRPASAKAVS AGSLTLASHS MLPGHLGNID AYIQAVNRIP LLSAEEERQY ATEYREQNNL DAARRLVLSH LRLVVSVARN YLGYGLPHGD LIQEGNIGLM KAVKRFDPAQ NVRLVSYAIH WIKAEIHEYI LRNWRMVKVA TTKAQRKLFF NLRSHKKGTQ AFTPEEIDGL AQELNVKREE VAEMETRLSG GDIALEGQID DGEESYAPIA YLADSHNEPT AVLAARQRDM LQTDGIARAL ESLDARSRRI IEARWLNVDD DGSGGSTLHD LAAEFGVSAE RIRQIEASAM KKMRTALAAY A
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