| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0517 |
|---|
| Symbol | cyoE |
|---|
| ID | 4903082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 479714 |
|---|
| End bp | 480616 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640133747 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_001064800 |
|---|
| Protein GI | 126453695 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGA CACTCTCCCA TACGCCCGGT AGCCGTCTCT CCCAGTATCT GGCGCTGACG
AAGCCGCGCG TCACGCAGCT CGCCGTGTTC TGCGCGGTGA TCGGGATGTT CCTCGCGACG
CCGGGCATGG TGCCGTGGAA AGTGCTGCTC GGCGGCACGA TCGGCATCGG GCTGCTCGCG
GGCTCGGCGT TCGCGATCAA TTGCCTCGTC GAGCAGAAGA TCGACGCGAT GATGCGGCGC
ACCGCGTGGC GTCCGTCCGC GCGCGGCGAG ATCACGACCC TGCAGATCCT CGCGTTCTCG
ACCGTGCTGG GCGGCCTCGG CGCGTGGACG CTCTACACGT TCACGAATCC GCTGACGATG
TGGCTGACGA TCGCGACGTT CGTCGGCTAC GCGGTGATCT ACACGCTCCT GCTCAAGCCG
ATGACGCCGC AGAACATCGT GATCGGCGGC GCGTCCGGCG CGATGCCGCC CGCGCTCGGC
TGGGCGGCCG TCACGGGCGC GGTGCCCGGC GACGCGTGGA TTCTCGTGCT GATCATCTTC
GTGTGGACGC CGCCGCACTT CTGGGTGCTC GCGCTCTACC GCCGCAAGGA CTACGAGAAC
GCCGGCCTGC CGATGCTGCC CGTCACGCAC GGCGAGCAGT TCACGCGGCT GCACATCCTG
CTGTACACGG TGATCCTGTT CGCCGTCACG ATGATGCCGT TCATCTCCGG GATGAGCGGG
GCCGTCTATC TGACGAGCGC GGTGCTGCTC GGCGCGCTCT TCCTCGCGTA TGCGTGGAAG
ATCTACCGCG ATTATTCGGA TGCGCTCGCG CGCCGCGCGT TCCGCTATTC GATCGTCTAT
CTGTCGCTGC TGTTCGCGGC GCTTTTGGTC GACCACTACG CACGTCCCGT GATCGGGATG
TAA
|
|---|
| Protein sequence | MDTTLSHTPG SRLSQYLALT KPRVTQLAVF CAVIGMFLAT PGMVPWKVLL GGTIGIGLLA
GSAFAINCLV EQKIDAMMRR TAWRPSARGE ITTLQILAFS TVLGGLGAWT LYTFTNPLTM
WLTIATFVGY AVIYTLLLKP MTPQNIVIGG ASGAMPPALG WAAVTGAVPG DAWILVLIIF
VWTPPHFWVL ALYRRKDYEN AGLPMLPVTH GEQFTRLHIL LYTVILFAVT MMPFISGMSG
AVYLTSAVLL GALFLAYAWK IYRDYSDALA RRAFRYSIVY LSLLFAALLV DHYARPVIGM
|
|---|
| |