| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0422 |
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| Symbol | |
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| ID | 4901089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 387656 |
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| End bp | 389242 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640133652 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001064705 |
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| Protein GI | 126452388 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.537378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTCA CGCACATCGC CGCCGCCGCG CTCGTCGCCG CCGCTTCCGT CGCCGCCGCG
AAACCGCTGA CGGTCTGCAC CGAGTCGAGC CCGGACGGCT TCGACGTCGT TCAGTACAAC
TCGCTCGTCA CGACGAACGC ATCCGCCGAC GTCGTCTTCA ACACGCTCGT GTCGTACGAC
GAAGCGACGA AAAAGGTGGT GCCCGCGCTC GCGGACAAAT GGGATGTGAG CGCCGACGGC
CTCGCGTACA CGTTCCATCT GCGCCCGAAC GTCGCGTTCC AGACCACCGA CTCCTTCAAG
CCGACGCGCG CGCTCGACGC CGACGACGTC GTCTTCACGT TCGGCCGGAT GCTCGACGAC
GCGAATCCGT GGCACAAGGT CGCGGGCGCG AGCGGCTTTC CGCATGCGCA GTCGATGGGC
CTCGCGAAGC TCGTGAAGGC GGTCACGAAG ATCGACGAGT CGACCGTGAA GTTCGAACTG
AACGAACCGA ACGCGACGTT CGTGCCGATC CTCACGATGG GCTTCGCGTC GATCTACTCG
GCCGAGTACG CGGATCAGCT GCTGAAGGCG GGCAAGCAGG CGGACTTGAA CGCGAAGCCG
GTCGGCACCG GGCCGTTCGT GCTGAAGAGT TACACGAAGG ACGCGGTGAT CCGCTACGAG
GCGAACCCGA CGTACTGGGG GCCGAAGCCG AAGGTCGAGC GCCTCATCTA CGCGATCACG
CCCGATCCGT CGGTGCGCGC GCAGAAGGTG AAGGCGGGCG AATGCCAGAT CGCGCTGTCG
CCGAAGCCGC AGGACGTCGC GGCCGCGAAG GCCGACCGCG CGCTGAGGGT CGTCGAGACG
CCCGCGTTCA TGACCGCGTT CGTCGCGCTC AACACGCAGA AGAAACCGCT CGACAACGAC
AAGGTTCGCG AGGCGCTCAA TCTCGCGTTC GATCGCGCGA CGTACCTGAA GGTCGTGTTC
GACAACACGG CGACGCCCGC GACGAATCCG TATCCGCCGA ACACGTGGAG CTACGCGAAA
TCGATCGCGC CGTATCCGCA CGATCCGGCG AAGGCGAAGC AGTTGCTCGC GCAGGCGGGC
TTCCCGAACG GCTTCTCGAC GACGATCTGG GTGCGCCCGA CGGGCAGCGT GCTGAACCCG
AACCCGAAGG CGGGCGCGGA GCTGCTGCAG GCCGACCTCG CGAAGATCGG CGTGAAGGCG
GACGTGCGGG TGATCGAATG GGGCGAGCTG ATCAAGCAGG CGAAGCTCGG CCAGCACGAT
CTGCTGTTCA TGGGCTTCGC CGGCGACAAC GGCGATCCGG ACAACATCCT CACGCCGCAA
TTCAGTTGCA ACTCGGTGAA GTCGGGCCTG AACTTCGCGC GCTATTGCGA TCCGAAGCTC
GACAAGCTGA TCGCCGACGC AAAGGAAACC GCCGATCAAG CCAAGCGCGC GAAGCTGTAC
GAGGCCGCGC AGAAGATCAT CCACGACGAG GCGCTGTGGA TTCCCCTCGG CTATCCGACC
GCCGCGGCGA TTACCCGGCC GAACGTCGCC GGCTATCGCG TGAGCCCGTT CGGGCGGCAG
CACTTCGACG CGGTCTCGGT GCAGTAA
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| Protein sequence | MRFTHIAAAA LVAAASVAAA KPLTVCTESS PDGFDVVQYN SLVTTNASAD VVFNTLVSYD
EATKKVVPAL ADKWDVSADG LAYTFHLRPN VAFQTTDSFK PTRALDADDV VFTFGRMLDD
ANPWHKVAGA SGFPHAQSMG LAKLVKAVTK IDESTVKFEL NEPNATFVPI LTMGFASIYS
AEYADQLLKA GKQADLNAKP VGTGPFVLKS YTKDAVIRYE ANPTYWGPKP KVERLIYAIT
PDPSVRAQKV KAGECQIALS PKPQDVAAAK ADRALRVVET PAFMTAFVAL NTQKKPLDND
KVREALNLAF DRATYLKVVF DNTATPATNP YPPNTWSYAK SIAPYPHDPA KAKQLLAQAG
FPNGFSTTIW VRPTGSVLNP NPKAGAELLQ ADLAKIGVKA DVRVIEWGEL IKQAKLGQHD
LLFMGFAGDN GDPDNILTPQ FSCNSVKSGL NFARYCDPKL DKLIADAKET ADQAKRAKLY
EAAQKIIHDE ALWIPLGYPT AAAITRPNVA GYRVSPFGRQ HFDAVSVQ
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