| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_0399 |
|---|
| Symbol | |
|---|
| ID | 4899814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 363348 |
|---|
| End bp | 365015 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640133629 |
|---|
| Product | Na+/H+ antiporter |
|---|
| Protein accession | YP_001064682 |
|---|
| Protein GI | 126455176 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.117645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCG TCTTCACTGT TTTGATCCTG TTGCTCGCGG TCGCGCTGTC CGGCGTCGCG
ACGCGCGTGC TACCGCTGCG GCTGCCGTTG CCGCTGATGC AGATCGCGAT CGGCGCCGTG
CTCGCGTGGC CCCGGTTCAA CCTGCACGTC ACGTTCGACC CCGAAATCTT CATGCTGCTG
TTCATTCCGC CGCTGCTGTT CGCGGACGGC TGGCGCATTC CGAAGCGCGA GCTGTACCTG
CAGCGGCGCG CGATCCTGAT GCTCGCGTTC GGCCTCGTGT TCATGACGGT ACTCGCGGTC
GGCTACTTCG CGCATGGGTT GATTCCCGGC CTGCCGCTGC CCATCGCGTT CGCGCTCGCC
GCGGTGCTCT CGCCGACCGA CGCGGTCGCG CTCGCCGGCA TCGCCGGCAA GGGTCGCATC
CCGCCGCAAC TGATGCACAT CCTGGAAGGC GAGGCGCTGA TGAACGACGC GTCGGGCCTC
GTCGCGCTCA AGTTCGCGAT CGCGGCCGCG CTGACCGGCA TGTTCTCGCT GCGCGACGCG
TCGATCAGCT TCGTGATCGT CGCATCGGGC GGCCTCGCGG CGGGCGCGGC GCTCGCGTGG
CTGTTCAGCG CGCTGTCGAC GCGCTTCCTG AACGCCGCGC AGGAAGGCGA CCCCGCGCCC
GGCATCGTGA TGACGCTGCT CGTGCCGTTC GCGTCGTATC TCATCGCAGA GCATCTCGGA
TTGTCGGGAA TCCTGTCGGC CGTCGCCTCC GGGATGATGA TGAACTACAC CAGCTTCTCG
AAGAGCAGCA CGGTCGCCGC GCGCGTGCGC GCGGAAAGCA CGTGGGCGAT GATCGAGTTC
GTGTTCAACG GAATGGTGTT CATCATGCTC GGGCTGCAGT TGCCGCACAT CATCGGCCGT
GCGCTCGTCG ATGCGCACCA CACGAGCGAC GCGCTCGTCG GCGCGATGAT CGGCTACGTC
GCCGCGATGC TCGCCGCGCT CTACGCGATC CGCTTCACGT GGGTGTGGCT GCTGCGCTGG
ATCGCGAGCC GCCGCGCGGC GAAGCAGGGG CTCGCCGGCA CGATGGCGGG CCTGCGCACG
ATCGCCGTGA TGACCGTGGG CGGCGTGCGC GGCGCGATCA CGCTCGCGGG CGTGCTGTCG
ATTCCGGTCG CGCTCGGCGA CGGCACGCCG CTCGCGGGCC GCGACACCGC GATCTTCGTC
GCGTCGGGCG TGATCCTCGG CTCGCTCGTC GTCGCGGTGA TCGCGCTGCC GCTGCTGCTG
CGCGGTGTGC GCCCGATGCG CAATCCGCAC GCGGAGGAGG AGCGCGCCGC GCGCGCGGCG
GCCGCGCAGG CGGCGATCCG CGCGGTGGAC GCGGCGCACG ACGCGCTCGC CGTCGATCTC
GACGAATCGG CCGCCGCGCG CTGCGCGGAC GTGACCGCGC GCGTGATGGA CCTGTACCGC
CGCCGGCTCG CGGGCCTCGC CGCCGACGGC GCGACGCCGC GCGAGGAAGC GCGACAGACG
GAGAAGATGG AGCTGGCGCT GAAGATCGCG GCGATCCGCG CGGAGCGTGC GGTGCTCTAC
CGGCTGCGCG GCGAGCAGAA GATCAACGAC GAGACGCTGG CGAAGCTGAT GCGCGAAGTC
GATTTTTCGG AGACGGCGCT GTCGACGCGC AAGAAGGGCA TCGTCTGA
|
|---|
| Protein sequence | MAIVFTVLIL LLAVALSGVA TRVLPLRLPL PLMQIAIGAV LAWPRFNLHV TFDPEIFMLL
FIPPLLFADG WRIPKRELYL QRRAILMLAF GLVFMTVLAV GYFAHGLIPG LPLPIAFALA
AVLSPTDAVA LAGIAGKGRI PPQLMHILEG EALMNDASGL VALKFAIAAA LTGMFSLRDA
SISFVIVASG GLAAGAALAW LFSALSTRFL NAAQEGDPAP GIVMTLLVPF ASYLIAEHLG
LSGILSAVAS GMMMNYTSFS KSSTVAARVR AESTWAMIEF VFNGMVFIML GLQLPHIIGR
ALVDAHHTSD ALVGAMIGYV AAMLAALYAI RFTWVWLLRW IASRRAAKQG LAGTMAGLRT
IAVMTVGGVR GAITLAGVLS IPVALGDGTP LAGRDTAIFV ASGVILGSLV VAVIALPLLL
RGVRPMRNPH AEEERAARAA AAQAAIRAVD AAHDALAVDL DESAAARCAD VTARVMDLYR
RRLAGLAADG ATPREEARQT EKMELALKIA AIRAERAVLY RLRGEQKIND ETLAKLMREV
DFSETALSTR KKGIV
|
|---|
| |