Gene BTH_II2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II2368 
Symbol 
ID3846688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2906560 
End bp2907165 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID637839668 
ProductRNA polymerase sigma factor 
Protein accessionYP_440555 
Protein GI161723121 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000117265 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCACG CGCGCGCCGC GCACGACGAT CCCGCCTATC TCGCGCAATT GCGCCATGAC 
TTACTTCGTT TCGCGCGTCT GCAATTGCGC GACGCCGACG CTGCCGAAGA CGCCGTCCAG
GAAGCGCTCG CGGCGGCGTG GGCACAGGCC CACCGCTTCG ACGGGCAGTC GAGCCACAAG
ACCTGGGTAT TCGGCATCCT GCGCAACAAG CTGATCGACA CGATTCGGGC GCGGCGAAGG
ACGATCAACG CGTCGGCGCT CGACGCCGAG CTCGACGGCG AAGCGCTTCT CGACCGCGAG
CTGTTCGCGG ACAATGGCCA CTGGGCGCCG CACGCGAAGC CGCGTCCGTG GCCGAAGCCG
GAAACGATCC TGCAGCAGCG GCAGTTCTGG ATGCTGTTCG AGGCGTGTCT CGATCACCTG
CCGGAGCAGA TCGGCCGCGT GTTCATGATG CGCGAGTTCC TCGATTTCGC AATCGACGAC
ATCTGCACGG AACTCGAGCT GAAGGCGAAC CATTGCAGCG TGCTGCTATA CCGCGCACGG
ACTCGATTGC GCACCTGTCT CACCGAAAAA GGCCTGACGA CCGAAGATGC TACTGGGGAA
ATGTAA
 
Protein sequence
MQHARAAHDD PAYLAQLRHD LLRFARLQLR DADAAEDAVQ EALAAAWAQA HRFDGQSSHK 
TWVFGILRNK LIDTIRARRR TINASALDAE LDGEALLDRE LFADNGHWAP HAKPRPWPKP
ETILQQRQFW MLFEACLDHL PEQIGRVFMM REFLDFAIDD ICTELELKAN HCSVLLYRAR
TRLRTCLTEK GLTTEDATGE M