Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II2368 |
Symbol | |
ID | 3846688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 2906560 |
End bp | 2907165 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637839668 |
Product | RNA polymerase sigma factor |
Protein accession | YP_440555 |
Protein GI | 161723121 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000117265 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCACG CGCGCGCCGC GCACGACGAT CCCGCCTATC TCGCGCAATT GCGCCATGAC TTACTTCGTT TCGCGCGTCT GCAATTGCGC GACGCCGACG CTGCCGAAGA CGCCGTCCAG GAAGCGCTCG CGGCGGCGTG GGCACAGGCC CACCGCTTCG ACGGGCAGTC GAGCCACAAG ACCTGGGTAT TCGGCATCCT GCGCAACAAG CTGATCGACA CGATTCGGGC GCGGCGAAGG ACGATCAACG CGTCGGCGCT CGACGCCGAG CTCGACGGCG AAGCGCTTCT CGACCGCGAG CTGTTCGCGG ACAATGGCCA CTGGGCGCCG CACGCGAAGC CGCGTCCGTG GCCGAAGCCG GAAACGATCC TGCAGCAGCG GCAGTTCTGG ATGCTGTTCG AGGCGTGTCT CGATCACCTG CCGGAGCAGA TCGGCCGCGT GTTCATGATG CGCGAGTTCC TCGATTTCGC AATCGACGAC ATCTGCACGG AACTCGAGCT GAAGGCGAAC CATTGCAGCG TGCTGCTATA CCGCGCACGG ACTCGATTGC GCACCTGTCT CACCGAAAAA GGCCTGACGA CCGAAGATGC TACTGGGGAA ATGTAA
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Protein sequence | MQHARAAHDD PAYLAQLRHD LLRFARLQLR DADAAEDAVQ EALAAAWAQA HRFDGQSSHK TWVFGILRNK LIDTIRARRR TINASALDAE LDGEALLDRE LFADNGHWAP HAKPRPWPKP ETILQQRQFW MLFEACLDHL PEQIGRVFMM REFLDFAIDD ICTELELKAN HCSVLLYRAR TRLRTCLTEK GLTTEDATGE M
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