| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1894 |
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| Symbol | |
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| ID | 3846244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 2296361 |
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| End bp | 2298652 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637839195 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_440088 |
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| Protein GI | 83717067 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGA TCGAACTGCG TAGTCCCCTG CTGGACCCGG ATGCTGTGGC GCTGAGCTTC
GTGGTGCACG AGAACCTGTC GCAGGAACCG TCGTATCAGC TCGACTTGCT GAGTCACGAC
CCGGATCTGG ACTTCGACGC GCTGCTCGGC TCGACACTGT CGGCCGACAT CGATCTGGGC
GGCGGCGACA TCCGGACGTT CAACACGCAC GTGTTCGGCG GCCACGACAC GGGGCAGATG
AGCGGGCAGT ACACGTACAC GCTGGAGCTG CGGAGCTGGC TGTCGTTTCT CGCGGAGAAC
CGCAACAGCC GGATCTTCCA GAACATGAGC GTGCCGCAGA TCGTCGAGCA GGTGTTCCAG
GGCCATCAGC GCAACGGCTA CCGGTTCGAA CTGGAAGGCA CGTACGAGCC GCGCGAGTAC
TGCGTGCAGT TCCAGGAAAC GGATCTGAAC TTCGTGAAGC GATTGCTGGA GGACGAAGGG
ATCTATTTCT GGGTCGAGCA CGAGCCGGAT CGGCATGTCG TGGTGATTTC GGACACGCAG
CGCTTCGAGG ATCTGCCGCT GCCGAACGAA ACGCTCGAGT ATTTGCCGGA CGGCGAGGAA
TCGCGGGCGA TCCAGGGGCG CGAAGGCGTG CAGCGGCTGC AGCGCACGCG CCGGATCAAG
GCAAGCAACG TCGCGCTGCG CGACTTCGAC TATCACGCGC CGTCGAACAA GCTCGACAGC
GACGCACAGC TGGTGTCGCC GCCGAATCTC GAAGGGATTC CGCTCGAGTA CTACGACTAT
GCGGCCGGCT ACCGCGAGCC GGAGCAAGGG GAGCGTCTCG CGCGGCTGCG GCTCGAAGCG
ATCCAGGCGG ATTCGCACAT GCTCGTCGGC GAGGCGAACG CGCGCGCGCT GGCGACGGGC
CGGGCGTTCA CGCTGATCGG GCATCCGGCG CTGGGCCGCA ATCGTCGGTA CTACGTGACG
AACAGCGAGC TGACGTTCAT TCAGGACGGG CCGGACAGCA CGTCGCAGGG GCGCAACGTC
GCGGTGAAGT TCCGCGCGCT CGCCGACGAT CAGCCGTATC GGCCGCTCTT GACGACGCCG
CGCCCCGAGG TGCCGGGCAT CCAGAGCGCG ACGGTGGTGG GGCCGGAGAT GTCGGAGGTG
CATACCGACA AGCTCGGGCG CATCCGCGTG CACTTCCACT GGGACCGCTA CAAGACGACC
GAAGCGGACG CCTCGTGCTG GATTCGCGTG TCGCAGGCGT GGGCCGGCAA GGGCTGGGGC
GTGATCGCGA TGCCGCGGGT CGGGCAGGAA GTGCTGATCA CGTACGTCGA CGGCGATCTC
GACCGTCCGC TCGTGACGGG CATCGTCTAC AACGGCGAAA ACCCGACGCC TTACGATTTG
CCGAAAGACA TCCGCTACAC GGGTCTCGTT TCACGTTCGA TCAAGCGCGC CGGCGGCTAC
CAGAACGCAA GCCAGATCAC GTTCGACGAT CAGCGCGGCG CGGAGCGCGT GATGATCCAC
GCGGAGCGCG ACATGCAGCA GACGGTCGAG CGCAACAGCT CCACGTCGAT CGCGCAGGAC
TTGAATCTGT CGGTGAAGGG CACGGCGACG TCGGTCGTCG GGATCTCGGT CAGCTTCACG
GGCATCTCGG TGTCGTACAC GGGGCTGTCG GTGAGCTTCA CGGGCGTATC GGCGAGTTTC
ACCGGCGTGA GCACATCGTT TACCGGCGTG AGCACGAGTT TCACCGGCGT GTCGACGTCG
TTTACCGGCG TGAGCACGAG CTTCATCGGC GTGTCGACGT CGTTTACCGG TGTCGATACA
GGCTTCAAGG GCGTGTCGAC GGCGATGATC GGTGTCTCGA CCAGCGTCGT GGGTTCCAGC
AATTCCGTGA CGGGCGTGTC GAACAGCATG ACGGGCATCT CGTCGTCGTG GACCGACGTC
AGCATGTCGA CGACCGGGCA GTCGCAGAGC ATGACCGGCG TATCGCTGTC GTACACGGGC
ACGTCGAACA GCATGACGGG CACGAGCACG TCGGTGACGG GCACGTCGAC GAGCATCACG
GGCACGTCGA TGTCGAACAC GGGCAGCTCG ACGAGCATCA CGGGCACGTC GATGTCGACG
ACGGGCAGCT CGACGAGCAT CACCGGCTCC AGCGTGTCGA CGACCGGCAG CTCGGTGAGC
ACGACGGGTT CGAGCGTATC GACGACGGGC AGCAGCGTGT CGACGACGGG ATTCAGCTTC
TCGTACACCG GGGCGAGCTA CTCGGACGTG GGCATCGACC TGAAGAAGGT CGGCATGCAA
GTGAAGAGCT GA
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| Protein sequence | MRLIELRSPL LDPDAVALSF VVHENLSQEP SYQLDLLSHD PDLDFDALLG STLSADIDLG
GGDIRTFNTH VFGGHDTGQM SGQYTYTLEL RSWLSFLAEN RNSRIFQNMS VPQIVEQVFQ
GHQRNGYRFE LEGTYEPREY CVQFQETDLN FVKRLLEDEG IYFWVEHEPD RHVVVISDTQ
RFEDLPLPNE TLEYLPDGEE SRAIQGREGV QRLQRTRRIK ASNVALRDFD YHAPSNKLDS
DAQLVSPPNL EGIPLEYYDY AAGYREPEQG ERLARLRLEA IQADSHMLVG EANARALATG
RAFTLIGHPA LGRNRRYYVT NSELTFIQDG PDSTSQGRNV AVKFRALADD QPYRPLLTTP
RPEVPGIQSA TVVGPEMSEV HTDKLGRIRV HFHWDRYKTT EADASCWIRV SQAWAGKGWG
VIAMPRVGQE VLITYVDGDL DRPLVTGIVY NGENPTPYDL PKDIRYTGLV SRSIKRAGGY
QNASQITFDD QRGAERVMIH AERDMQQTVE RNSSTSIAQD LNLSVKGTAT SVVGISVSFT
GISVSYTGLS VSFTGVSASF TGVSTSFTGV STSFTGVSTS FTGVSTSFIG VSTSFTGVDT
GFKGVSTAMI GVSTSVVGSS NSVTGVSNSM TGISSSWTDV SMSTTGQSQS MTGVSLSYTG
TSNSMTGTST SVTGTSTSIT GTSMSNTGSS TSITGTSMST TGSSTSITGS SVSTTGSSVS
TTGSSVSTTG SSVSTTGFSF SYTGASYSDV GIDLKKVGMQ VKS
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