| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1731 |
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| Symbol | hpcD |
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| ID | 3845007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 2094481 |
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| End bp | 2094873 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637839032 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta isomerase |
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| Protein accession | YP_439925 |
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| Protein GI | 83716423 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3232] 5-carboxymethyl-2-hydroxymuconate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.628874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCACA TCATCGTCGA ATACACCGCG AACATTCGTG ACGACGCGCG GATTCCCGTG
CTGCTCAAAA CGATCAACGA GACGCTGATC GCGCAGGGCG GCGTGTTCCC GACGGGCGGC
ATCCGCTCGC GCGCGATCGA GCTGCAGGAT TACTGCGTCG CGGACGGCAC AGCCGACGAC
GCGTTCGTGC ACGTGACGCT GAAGATCGGC TCGGGCCGCG ACGACGCGAC GAAGAAGGCC
GCGTGCGACG CGCTATTCGA CGCGATCAAG GCGCATTTCG CGGCGCTCTA CGAACGGCGC
TATCTCGCGC TCTCGATGGA GCTCGCCGAG TTCAGCGAGA CGGGCTCGTA CAAGCACAAC
AACATTCACG CGCGCTACAG GCGCGGCGCG TGA
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| Protein sequence | MPHIIVEYTA NIRDDARIPV LLKTINETLI AQGGVFPTGG IRSRAIELQD YCVADGTADD
AFVHVTLKIG SGRDDATKKA ACDALFDAIK AHFAALYERR YLALSMELAE FSETGSYKHN
NIHARYRRGA
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