| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1410 |
|---|
| Symbol | |
|---|
| ID | 3844830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1661718 |
|---|
| End bp | 1662407 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637838712 |
|---|
| Product | histidine ABC transporter, permease protein |
|---|
| Protein accession | YP_439606 |
|---|
| Protein GI | 83717299 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.157931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTTC AAGGCTTCGG CCCGCTGCTG TGGGCCGGCA CGATCGAGAC GGTCAAGCTC
GCCGTGCTTT CGCTTGCCGC GTCGCTTGTG CTCGGGCTCG CCGGCGCGGC CGCCAAGCTG
TCGTCCAATC GCGCGTTGGC GAGCGTCGGC ACGTTCTACA CGACGCTGAT TCGCGCGGTG
CCGGATCTCG TGCTGATGCT GCTGCTGTTC TATGGCATCC AGATCCTGCT GAACAACGCG
ACCGACATGC TCGGCATCGA TCAGATCGAC ATCGACCCGT TCGTCGCCGG CGTGCTGACG
CTCGGCTTCA TCTACGGCGC GTACTTCACC GAGACGTTTC GCGGCGCGTT CCTCGCGGTG
CCGCGCGGGC AGCTCGAAGC GGGCTTCGCG TACGGCATGG GTTCGTGGCG CGTCTTCGCG
CGGATCATGT TTCCGCAGAT GATGCGCTTT GCGCTGCCCG GCATCGGCAA CAACTGGCAG
GTGCTCGTGA AGGCGACGGC GCTCGTGTCG ATCATCGGCT TGGCCGACGT CGTGAAGGCG
TCGCAGGACG CGGGCAAGAG CACGCTGAAC TTCTTTTTCT TCACGCTCGC GGCGGGCGCG
ATCTATCTCG CGATCACGAC GCTGTCGAAC GTCGTGCTGA TGTACCTCGA AAAACGCTAT
TCGGCGGGTG TGCGGAGGCT GGCGCTGTGA
|
|---|
| Protein sequence | MLFQGFGPLL WAGTIETVKL AVLSLAASLV LGLAGAAAKL SSNRALASVG TFYTTLIRAV
PDLVLMLLLF YGIQILLNNA TDMLGIDQID IDPFVAGVLT LGFIYGAYFT ETFRGAFLAV
PRGQLEAGFA YGMGSWRVFA RIMFPQMMRF ALPGIGNNWQ VLVKATALVS IIGLADVVKA
SQDAGKSTLN FFFFTLAAGA IYLAITTLSN VVLMYLEKRY SAGVRRLAL
|
|---|
| |