Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1171 |
Symbol | nirD |
ID | 3845597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 1365920 |
End bp | 1366273 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637838474 |
Product | nitrite reductase [NAD(P)H], small subunit |
Protein accession | YP_439368 |
Protein GI | 83716467 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.106573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCC AACGTCATGC ATCCGCTTGG ACGCCCGTGT GCGCGCTCGA CGAGATCGTG CCGAACACCG GCGTGTGCGC GCTCGTCAAC GGCGAGCAGG TGGCCGTGTT CCATGTCGAC GCCGGCGACG GCGGCCGCGC GTTCGCGATC GGCAACGTCG ATCCGCATTC GCAGGCCGCC GTGCTGTCGC GCGGGCTGAT CGGCAGCCTG GGCGAGCGGA TCGTCGTCGC GTCGCCGCTC TACAAGCATC ACTTCGACCT GCGCACGGGC GAGTGCGTCG AGGCGCCGGA CAAGTCGGTG AGCGCGTATG CGTCGCGCAT CGAGGACGGC TACGTGTGGG TCGCGGCGGC GTAA
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Protein sequence | MNSQRHASAW TPVCALDEIV PNTGVCALVN GEQVAVFHVD AGDGGRAFAI GNVDPHSQAA VLSRGLIGSL GERIVVASPL YKHHFDLRTG ECVEAPDKSV SAYASRIEDG YVWVAAA
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