| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0742 |
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| Symbol | |
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| ID | 3846718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 872725 |
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| End bp | 873717 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637838045 |
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| Product | type III secretion inner membrane protein SctT, putative |
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| Protein accession | YP_438939 |
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| Protein GI | 83717347 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.588994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCT ACGACATCTT TGCGCTTCAG CACCTGGGCG ACGAATTCAT CGGCTTCATC
GTGCTGCTCG CGCTGTCGAG CGAGCGGCTG CTCGTGATCA TGTCGATCCT GCCCGCGACC
GCCGACACCG TGCTGAAAGG CCCGATGCGC AGCGGCGCGG CGGCGCTCTG GTGCCTGTTC
GTCGCGTGCG GGCAGCAGGC GCTGATTCCG CAGCTTCACG GCGCGTTTCT CGTGATCGCA
TGCTTGAAGG AGGCCGTGAT CGGGCTTGTG ATCGGCATTG CGGCGTCGAC GGTGTTCTGG
GCCGCCGAGG CGATCGGCAC GTATGTCGAC GACGTCGCCG GCTTCAACAA CCTGCAGATG
CAGAATCCGA GTTCGGGCAC GCAGACGTCG CTGATGGCGA CGCTGTTCGG GCAACTGACG
ATTGCGTCGT TCTGGCTGCT GGGCGGCATG ACGTTCCTGC TCGGCGCGCT GTACGAATCG
TACGCATGGT GGCCGCTCGG CTCGTTCGAT CCGGTTCCCG CGCCGCTCCT CGAGATGTTC
GCGCAGGCGC GGCTCGACAT GCTGATGAAC ATGGTCGCGC GGATCGCGAC GCCGATGATG
ACGATGCTGG TGCTCGTCGA CCTGGGCCTC GCGTTCGTCG CGCGATCGGC GCAGAAGCTC
GATCTGATGT CGGTCAGCCA GCCGCTCAAG GGCGCGATCG CGGTGCTGAT CGTCGCGGTG
CTGGCGGGCA ATTTCGTGAA CGAGATGCGC GGGCAGATTT CGCTCGCGGA ACTGGCGCAG
CAGGTCAGAC GGCTTGCGGA GCGGCCGGGA CGCGATGGGA AGACGGATGG CGGCGGCGGG
GCTTCGGGGG CTTCAGGCGT TTCGGGCGTT TCGGGCGTTT CGGGCGTTTC GGGCGTTTCG
GGCGTTTCGG GCGTTTCGGG CGTTTCGGGC GTTTCGGGCG TTTCGGGCGT TTCGGGCGTT
TCGGGCGCGA CCAGTGTCAC ATCCATCCGC TGA
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| Protein sequence | MNTYDIFALQ HLGDEFIGFI VLLALSSERL LVIMSILPAT ADTVLKGPMR SGAAALWCLF
VACGQQALIP QLHGAFLVIA CLKEAVIGLV IGIAASTVFW AAEAIGTYVD DVAGFNNLQM
QNPSSGTQTS LMATLFGQLT IASFWLLGGM TFLLGALYES YAWWPLGSFD PVPAPLLEMF
AQARLDMLMN MVARIATPMM TMLVLVDLGL AFVARSAQKL DLMSVSQPLK GAIAVLIVAV
LAGNFVNEMR GQISLAELAQ QVRRLAERPG RDGKTDGGGG ASGASGVSGV SGVSGVSGVS
GVSGVSGVSG VSGVSGVSGV SGATSVTSIR
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