| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0655 |
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| Symbol | prpD |
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| ID | 3846665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 767403 |
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| End bp | 768854 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637837960 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_438854 |
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| Protein GI | 83717372 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.781921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCC CGATCCCGAA CGTCCGGCCT GAGCCGGATT CAGTGCTGGT CGATATCGCC
GACTACGTGC TGAACCATCG CATCGACAGT GCGCGCGCGC TCGAAACCGC GCGCCACTGC
CTGATCGATA CGCTCGGGTG CGGGCTCGAG GCGCTGTCGT ATCCCGCCTG CACGAAGCTG
CTCGGACCGA TCGTGCCGGG CACGATCGTG CCGCACGGCG CGAAGGTGCC GGGCACGTCG
TTCCAGCTCG ATCCGGTGCA GGCCGCGTTC GACATCGGCG CGGCGATCCG CTGGCTCGAC
TTCAACGACA CCTGGCTCGC GGCCGAATGG GGCCATCCGT CCGACAACCT GGGCGGCATC
CTCGCGACGG CCGACTGGCT GTCGCGCACC GCCGTCGCGT CCGGCAAGCG GCCGCTCGCG
ATGAAAGACG TGCTCGTCGC GATGATCCAG GCGCACGAGA TCCAGGGCTG CCTCGCGCTC
GAGAATTCGT TCAATGCCGT CGGCCTCGAC CACGTGCTGC TCGTGAAGGT CGCGTCGACC
GCGGCCGTCG GCCGCCTGCT CGGCCTCACG CGCGACGAGT TGATCAACGC GCTGTCGCTC
GCGTTCGTCG ACGGCCAGGC GCTGCGCACC TATCGGCACG CGCCGAACAC GGGCTCGCGC
AAGTCGTGGG CGGCGGGCGA CGCGACCTCG CGCGCGGTGC GCCTCGCGCT GATCGCGAAG
ACGGGCGAGA TGGGCTATCC GTCCGCGCTG AGCGCGAAGA CCTGGGGCTT CTACGACGTG
TCGTTCGGCG GCAGGCCGTT CCGTTTCCAG CGCCCGTACG GCACGTACGT GATGGAGAAC
GTGCTGTTCA AGATCTCGTA TCCGGCCGAG TTCCATGCGC AGACGGCCGT CGAGGCCGCG
ATGGCGCTGC ACGCGCAGCT CGCGGCCGCC GGCCGCTCGG CGGACGAGAT CCGCCGCGTC
ACGGTGCGCA CGCACGCGGC GGCGATCCGC ATCATCGACA AGCAAGGCCC GCTCGCGAAC
CCGGCCGACC GCGATCACTG CCTCCAGTAC ATGATCGCCG TGCCGCTCCT GTTCGGCCGC
CTCGCGGCCG CCGACTACGA GGACGCGGTG GCGGCCGATC CGCGGATCGA CGCGTTGCGC
GCGAAGATCG CGTGCGTCGA GGACCCGCAG TTCACGAAGG ATTATCACGA TCCGTCGAAG
CGCTCGATCG CGAACGCGCT CGCGATCGAG TTCGACGACG GATCGACGCT CGCCGAGGTG
GCGGTCGAGT ATCCGATCGG CCACATGCGG CGGCGCGCCG AAGGGATTCC GCTCCTGATC
GACAAGTTCA GGACGAATCT CGCGCGCCGT TTTCCGGCGA AGCAGCAACA AGCGATTCTC
GACGTGTCGC TGGACCAGGC AAAGCTCGAA GCGATGCCGG TCGATGAGTA CGTCGATCTG
TATGTGATCT AG
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| Protein sequence | MSAPIPNVRP EPDSVLVDIA DYVLNHRIDS ARALETARHC LIDTLGCGLE ALSYPACTKL
LGPIVPGTIV PHGAKVPGTS FQLDPVQAAF DIGAAIRWLD FNDTWLAAEW GHPSDNLGGI
LATADWLSRT AVASGKRPLA MKDVLVAMIQ AHEIQGCLAL ENSFNAVGLD HVLLVKVAST
AAVGRLLGLT RDELINALSL AFVDGQALRT YRHAPNTGSR KSWAAGDATS RAVRLALIAK
TGEMGYPSAL SAKTWGFYDV SFGGRPFRFQ RPYGTYVMEN VLFKISYPAE FHAQTAVEAA
MALHAQLAAA GRSADEIRRV TVRTHAAAIR IIDKQGPLAN PADRDHCLQY MIAVPLLFGR
LAAADYEDAV AADPRIDALR AKIACVEDPQ FTKDYHDPSK RSIANALAIE FDDGSTLAEV
AVEYPIGHMR RRAEGIPLLI DKFRTNLARR FPAKQQQAIL DVSLDQAKLE AMPVDEYVDL
YVI
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