Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0171 |
Symbol | fliF |
ID | 3845726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 205598 |
End bp | 207253 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637837477 |
Product | flagellar MS-ring protein |
Protein accession | YP_438373 |
Protein GI | 83718135 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTAGCCA AACTCAAAGC TGCCGTCGTC AGTCGGCTTC CATCGAACCT GCCGTCGTTG ATGCCGTCGC CGGCCGCGTT GTCGCGGCTG ATCCCGCTCG TCGTGCTCGC GGTCGCGTTG ACCGCCGCGG CGACGCTCTA CATGCGCTAC GACCAAGCGA ATTACAAGCC GCTGTTCGGC GCGCGCGAGC CGGTGCAACT CGATGACGTC GTGTCGGCGC TCGACGCCCA GCGCATCCCG TACCGCATTC ATCCGGATAC CGGGCAGGTG CTCGTCGCGC GCTCGGATGT CGCGCGGGCG AGGATGATGC TCGCCGCGCG CGGCGTCACC GCGAAGGCGG CGCCCGGGCT CGAGCAGATC GATCAGGACG ACCCGCTCGG CACGAGCCAG TTCGTGCAGG ACGTGCGATT CCGCCGGGGC CTCGAGAGCG AGCTGGCGCA GAGCATTGCG ACGCTCGACC CGGTCGAGCG CGCCCGCGTG CATTTGTCGA TTGCGAAGTC GTCGTCGTTC GTGATGATGG ATGGCGACAA GAGCGCCGCG TCCGTCGTGT TGACGCTCAA GCCGGGAGCG CGTCTTGCGA AGGAGCAGAT CGCCGCGGTC ATCAATCTCG TCGCCGGCAG CGTGCCGAAT CTGGCGCCGG GGAAGGTTTC GGTCGTCGAT CAGCACGGCG CGTTTTTGTC CGCGCGCGTC GATCTGGACG GTGATCTGAC GGGCAACGAC GAAATCGCGG CGCGGTTTCG CGACGACGTG ACGCGCAATG TCGAGGATTT GCTGGCGCCG TCGCTCGGCC CCGGGAACTT CCGCGTCAGC GTGACGGCGG TCGTCAACAA CGACCGTGTC GAGGAAACGC GCGAACAGTT CGGCGAAGCA CCGAAGGTGA TGAACGAGGC GACCCGCAAC GAGCAGAACC GCGATCGCGT CGCGCTTGGC GTGCCGGGCT CGTTGAGCAA CCGTCCGGTC GACGTGCCCG CGTCCGGCCC GGACGTCGAC GGCGGCTCGC GGCGCAACGC GACGACGCGC CAGTTCGCAT ACGACCGCAA CATCACGCAG ATCAAGCGCG GGCGCGGGCA GCTCGAGAAG CTGAGCGTCG CCGTCGTGCT CAACAACGCG GTGTCGCCCA CCAAGGGCAA GCCCTGGCAG CCGGATCAAT TGCGACGCAT CGACGACATT CTGCGCAGCG GCCTTGGCAT AGACAAGCAG CGCGGCGACC AGCTGATCGT GTCGTCGCTC GACTTTGCCG CGCCGGCGCC GGCCGAGCCG TGGTGGAAGG AGCGCGACAC CCTCGAGCAG GGCGGCTGGT ATCTGACCTA CGCGCTGGCG GCCCTGTTCG GCTACTTGCT GCTCGCGCGG CCGATGCTGC GCATGCTGCA GCAATGGATG CAACACCGGT ATGGCGCGCC GCCCGCCGCC GCGCCGGCGT CCCGGCTGCA GGCCCCTGAG GGCGGCGATG CGCAAGCGGC GCTGCCGGCC CCGGACGACG CGCGGCCGCC CCTCGGCGCA ATGTTGCCCC TCCTCGACGA CGTGGAGCTG CCGCCTGCCG ATTCGGGCGT CGAGGTGCTG ATCGGCCACT TGCGTTCGCT CTCCGAGAAG GAGCCCGAGC GCGTCGCTGA AGTCGTCAAA CAATGGATAC GAAATGATGG AAACGCCAGT AGCTGA
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Protein sequence | MLAKLKAAVV SRLPSNLPSL MPSPAALSRL IPLVVLAVAL TAAATLYMRY DQANYKPLFG AREPVQLDDV VSALDAQRIP YRIHPDTGQV LVARSDVARA RMMLAARGVT AKAAPGLEQI DQDDPLGTSQ FVQDVRFRRG LESELAQSIA TLDPVERARV HLSIAKSSSF VMMDGDKSAA SVVLTLKPGA RLAKEQIAAV INLVAGSVPN LAPGKVSVVD QHGAFLSARV DLDGDLTGND EIAARFRDDV TRNVEDLLAP SLGPGNFRVS VTAVVNNDRV EETREQFGEA PKVMNEATRN EQNRDRVALG VPGSLSNRPV DVPASGPDVD GGSRRNATTR QFAYDRNITQ IKRGRGQLEK LSVAVVLNNA VSPTKGKPWQ PDQLRRIDDI LRSGLGIDKQ RGDQLIVSSL DFAAPAPAEP WWKERDTLEQ GGWYLTYALA ALFGYLLLAR PMLRMLQQWM QHRYGAPPAA APASRLQAPE GGDAQAALPA PDDARPPLGA MLPLLDDVEL PPADSGVEVL IGHLRSLSEK EPERVAEVVK QWIRNDGNAS S
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