| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0058 |
|---|
| Symbol | |
|---|
| ID | 3844414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 53920 |
|---|
| End bp | 57123 |
|---|
| Gene Length | 3204 bp |
|---|
| Protein Length | 1067 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637837364 |
|---|
| Product | AcrB/AcrD/AcrF family transporter |
|---|
| Protein accession | YP_438260 |
|---|
| Protein GI | 83717160 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC CTCGCCTCGG ACTGTCCGGC AGCATCGCCG CCTTCTTCCA GCAAAACCGG
ATCACCCCCC TGATCGCGCT GGTGGCGCTC CTGCTCGGCC TGTTCGCAAT GGTCATGACG
CCACGCGAAG AGGAGCCGCA GATCAACGTC ACGATGGCCA ACGTGCTCGT GCCGTTTCCG
GGCGCGAGCG CGCACGACGT CGAGCAAATG GTGGCCGGGC CCGCCGAGCA GGTGCTGTCG
CGGATCAGCG GCATCGAGCA CGTCATGTCG GTCTCGCGGC CGGGGCTCGC GGTGCTGACG
GTTCAGTTCA AGGTCGGCGT GCCGCGCACC GAGGCGCTGG TCAGACTGTA CGACACCGTG
TTCTCGAATC AGGACTGGCT GCCGCGGAAT CTCGGCGTGC TGCCCCCGCT GATCAAGCCG
AAAGGCATCG ACGACGTGCC GATCGTCGTG CTCACGCTCT ACGGCACGCG GCCGGATGCC
AATGCATTCG ATCTGGAGCG CGTCGGTCAT TCGATCGAGG CCGACCTCGA GCGCGTGCCC
GGCACGCGGG AAGTCACGAC GATGGGCGGC CCGCAACGCG CCGTCAACGT GCTGCTCGAT
CCCGGCCGCA TGCGCGCTGC GCAGGTGACC GTCGACGATC TGCGCCGCGT GCTCGCCTCC
GCCAACGCGG GGGCATCGGT CGGCGATCTC GTGCGTGACG ACCGTGCCAT CCATATCGAA
AGCGGCCCGG TGCTCGCCGA TGCGCGCGAC GTCGGCAACG TGATCGTGGC CGTACATGAC
GGCCACCCCG TATCCGTCGG CGACGTGGCC GACGTGCGCG ACGGCGCGCC CGCGCCCACC
CGCTATGTCT GGGAAGGACT CGCCGGCGCG CATCCGGCCG AATACCCGGC CATCTCCGTC
ACGGTGACAA AGAAGCCGGG CGAGAATGCG GTCGCCGTCG CGAGGAACGT GCTCAAGCGA
GTCGACACAT TGCGCAATAC CGTCATCCCG GGCGACGTGA AGATTGAAGT CGCGCGCGAC
TACGGCGTCA CGGCCAACGC GAAAGCGCTG AAGCTGATCG AGAAGCTCGC CTTCGCCACC
ACATCGGTCG TCGTGCTGGT GCTCGTCGCG CTCGGCTGGC GCGAGGCGCT CGTGGTCGGT
CTCGCGGTCG TCCTGACGCT CACCGCCACG CTGTTCGCAT CGTGGGCGTG GGGCTTCACG
CTGAATCGCG TCTCGCTGTT TGCATTGATT CTCGCGATCG GCATCCTCGT CGACGATGCA
ATCGTCGTCG TCGAGAACAT TCACCGCCAT CATCTGCTCG AACCGGACGC GCCGCTTGCA
TCGGTGATCC CGCGTGCGGT CGACGAAGTC GGTGGCCCGA CGATACTCGC GACACTGACC
GTGATCGCCG CGCTACTGCC GATGGCATTC GTCACGGGGC TCATGGGTCC GTACATGAGC
CCGATACCGA TCAACGCGAG CATGGGAATG GCGATCTCGC TGTCGGTCGC GTTCGTGGTG
ACGCCCTGGC TGTCCCGCAT CTGGCTGGCG CAAGCGCGGC ACGACGCGAA AGGCGGCTTG
CACGCGAAGC TCGAACCGCT GTTCGGCAGG ATCTTCGCGC CGTTCCTCGA CGATGCGGCG
GGCGCAAGGC ACCGCAACCT GCTGTGGCTT GCCATTGCCG GCGCGATCGC GCTGTCGCTC
ACGTTGCCGG TGCTCCAGTG GGTCGTGCTG AAAATGCTGC CGTTCGACAA CAAGTCCGAG
TTCCAGATCG TCGTCGACAT GCCGGCCGGC ACGCCGCTCG AACGGACCGC CGCGGTTCTT
CACGAGATGG GCGCGTACCT CGCGACCGTC CCGGAAGTGT CCACCTACCA GGCGTACGCA
GGCCTGTCGG CCCCGATCAA TTTCAATGGT CTCGTCCGCC AATACTATTT GCGCGCGGGC
GGCAACGTGG GCGATATCCA GGTCAACCTG GTCGACCAGT CCAGGCGCCG GCGGCAAAGC
CACGCGATCG CCACCGCCGT GAGACCGGCG CTCGAGCGCA TCGCCGAACG CAGTGGCGCA
CGCGTGAAAG TGGTCGAAGT GCCGCCGGGG CCGCCGGTGC TCGCGCCCAT CGTTGCCGAG
GTGTACGGCA CCGGGACGGA CGAACGAAAC CGCGTGGCAC ACGAGGTTCG TCGCGTATTC
TCGACGACGC GCGGCGTCGT GGACGTCGAC GACAGCACGG TTGCCGCGGC CCCGCAACGC
GATTTCGATC TCGATCGCCG CAAGGCCGGC CTGCGCGGCG TCTCGCAGGC CGACGTCGCC
CGCACGCTCA GGACGGGACT CACCGGTGAC GACGTCACGT ACCTTCACGA CGGCAGCAAA
TACCCGGCCG CCGTCCGGCT CGCGTTGCCG GCCTCGCTCG AAGGCGACGC GTCCGCACTG
CTGGCGCTGG CGGTCCGAGG CAGCGACGGT CAGTTGATTC CGCTGTCGGA GCTCGTGCGC
GAGCGGAGCA GCCAGATCGA ACAGCCGATT TACCACAAGG ATCTGCTGCC CGTTACCTAT
GTCGTCGGCG ACATGGCCGG CAGGATCGAC AGCCCGCTGT ACGGGATGTT CGAGATGCGC
GGCCGCCTGT CGAAGCTCGC GACGCCCGGC GGCGGCCCGC TAGGCGAATG GTTCATTCGT
CAGCCGGACG ACCCGTACCG CTCGTTCGCG ATCAAATGGG ACGGCGAATG GCAGGTGACG
TACGAAACCT TCCGGGACAT GGGCATCGCC TATGCGGTCG GGCTCGTGCT GATCTATCTG
CTCGTCGTCG CGGAATTCGG CTCCTACCTG ACACCGTTGA TCATCATGGC GCCGATCCCG
TTGACGATCA TCGGCGTGAT GCCCGGCCAC GCGTTGCTCG GCGCGCAGTT CACCGCGACG
TCGATGATCG GCATGATCGC GCTCGCCGGC ATCATCGTGC GCAACTCCAT CCTGCTCGTC
GACTTCGTGA ACCTTCAGGT GACCGAGGGC GTCCCGTTCA AGGACGCGAT CGTGCGATCC
GCGGCCACGC GCGCGCAACC CATCCTGCTC ACCGCATTCG CCGCGATGAT CGGCGCGTTC
TTCATCCTTG ACGATCCGAT CTTCAACGGC CTGGCGGTAT CGCTGATTTT CGGAATCCTG
GTATCGACGC TGCTCACGCT CGTCGTCATC CCGTTGCTCT ACTACACCGC CTACCGGCGG
CGTCCTCTTC CTGCCCATCG TTGA
|
|---|
| Protein sequence | MSAPRLGLSG SIAAFFQQNR ITPLIALVAL LLGLFAMVMT PREEEPQINV TMANVLVPFP
GASAHDVEQM VAGPAEQVLS RISGIEHVMS VSRPGLAVLT VQFKVGVPRT EALVRLYDTV
FSNQDWLPRN LGVLPPLIKP KGIDDVPIVV LTLYGTRPDA NAFDLERVGH SIEADLERVP
GTREVTTMGG PQRAVNVLLD PGRMRAAQVT VDDLRRVLAS ANAGASVGDL VRDDRAIHIE
SGPVLADARD VGNVIVAVHD GHPVSVGDVA DVRDGAPAPT RYVWEGLAGA HPAEYPAISV
TVTKKPGENA VAVARNVLKR VDTLRNTVIP GDVKIEVARD YGVTANAKAL KLIEKLAFAT
TSVVVLVLVA LGWREALVVG LAVVLTLTAT LFASWAWGFT LNRVSLFALI LAIGILVDDA
IVVVENIHRH HLLEPDAPLA SVIPRAVDEV GGPTILATLT VIAALLPMAF VTGLMGPYMS
PIPINASMGM AISLSVAFVV TPWLSRIWLA QARHDAKGGL HAKLEPLFGR IFAPFLDDAA
GARHRNLLWL AIAGAIALSL TLPVLQWVVL KMLPFDNKSE FQIVVDMPAG TPLERTAAVL
HEMGAYLATV PEVSTYQAYA GLSAPINFNG LVRQYYLRAG GNVGDIQVNL VDQSRRRRQS
HAIATAVRPA LERIAERSGA RVKVVEVPPG PPVLAPIVAE VYGTGTDERN RVAHEVRRVF
STTRGVVDVD DSTVAAAPQR DFDLDRRKAG LRGVSQADVA RTLRTGLTGD DVTYLHDGSK
YPAAVRLALP ASLEGDASAL LALAVRGSDG QLIPLSELVR ERSSQIEQPI YHKDLLPVTY
VVGDMAGRID SPLYGMFEMR GRLSKLATPG GGPLGEWFIR QPDDPYRSFA IKWDGEWQVT
YETFRDMGIA YAVGLVLIYL LVVAEFGSYL TPLIIMAPIP LTIIGVMPGH ALLGAQFTAT
SMIGMIALAG IIVRNSILLV DFVNLQVTEG VPFKDAIVRS AATRAQPILL TAFAAMIGAF
FILDDPIFNG LAVSLIFGIL VSTLLTLVVI PLLYYTAYRR RPLPAHR
|
|---|
| |