| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2833 |
|---|
| Symbol | |
|---|
| ID | 3847800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 3249755 |
|---|
| End bp | 3250987 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637842501 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_443345 |
|---|
| Protein GI | 83720406 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0920075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGCA CGCGTGCGCA AGCGCGCCGC CGTTGCATGC GCGCGATTCG CGGCCGCGCC
GGCGCGACGC GCATCGACGC AATCGCCGCG CAAGCCGTCT CGCGCACTTC ATTCAAACGT
TTAAAACCAC GGGATCGCGC TGCGCAAGCA TTCGACGATG CGCAGCGCGA TCGACGCGCG
TGCGCGCCGC CAAAGCGACG TCACCCCGCG CCGCGCTTGG CGCCACGCTC TGCCCGGCCC
GTCGCCGCGC GCGGCGCCGT CATCAGTTCT TCATCGACGC CGTCGATAAT TCCCTTCGAC
GAAAACGTTT ACATCGCTTT GCGCATGCTC ATGACGCCCA TCCCGAAGGA TGCCGCCGCA
CTCGCCCGCC CCGCCGCCTC GGCCGGCCCG GACGGGCCGC CCGCGGTCCG CCGCGCACGC
CGCGCGCCGC TCGACTGGCT CGCCGCCGCG CAATGGGCGG TCACGCTCGC GCTGTGCGCA
TTCCTGATCG TGCCCGTCGC GATGTCGGTG CTCGCCGGGC TCACGGTCAA CTATTTCCGA
GGCCCGTCGA GTGGCCTCAC GCTGCGCTGG CTCGGCGAAG TGTGGGCGCA ATATCACGGC
TCGGTGTTCC TGTCGCTCGA AGTCGCGCTC GCGACGCTCG CCGTCACGCT CGTCGCGGGC
GTGCCCGCCG GCTACGCGCT CGCGCGCGGC CGCAGCCGCG TCTCGCGGCT GATCGAAGAG
GCGCTCGTGC TGCCCGTCGC GCTGCCGGGC CTCGCGTCCG CGCTCGCGCT GCTCTGCGTG
TACGGCGGCT TCGCCGCGTT CCGCACGAGC ATGTGGTTCA TCGTCGTCGG CCACGTCGTG
TTCACGCTGC CGTTCATGGT CCGCGCGGTC GCGGCCGTCG CCGCGCGCGC CGATCTGCGC
ACGCTCGAAG AAGGCGCGGC GAGCCTCGGC GCATCGTTCG TCACGCGCTT TGCGACGATC
GTGCTGCCGA ACCTGCGCCC CGGCATCGTC GCGGGCGCGC TCGCGGTGCT CACGCTGTCG
ATCGGCGAAT TCAACCTCAC GTGGATGCTG CACACGCCCG ACACGAAGAC GCTGCCCGTC
GGCCTCGCCG ACACGTACGC GTCGCTGCGC CTCGAAATCG GCAGCGCGTA CACGATCCTG
TTCCTGCTGA TGACGCTGCC GCTGCTCGTC GCGATGCAGC GGCTCGGCGT CGAGGCGCCG
GGCGCACGCG ACGGCGCGCG CCAGCGCCGC TGA
|
|---|
| Protein sequence | MRRTRAQARR RCMRAIRGRA GATRIDAIAA QAVSRTSFKR LKPRDRAAQA FDDAQRDRRA
CAPPKRRHPA PRLAPRSARP VAARGAVISS SSTPSIIPFD ENVYIALRML MTPIPKDAAA
LARPAASAGP DGPPAVRRAR RAPLDWLAAA QWAVTLALCA FLIVPVAMSV LAGLTVNYFR
GPSSGLTLRW LGEVWAQYHG SVFLSLEVAL ATLAVTLVAG VPAGYALARG RSRVSRLIEE
ALVLPVALPG LASALALLCV YGGFAAFRTS MWFIVVGHVV FTLPFMVRAV AAVAARADLR
TLEEGAASLG ASFVTRFATI VLPNLRPGIV AGALAVLTLS IGEFNLTWML HTPDTKTLPV
GLADTYASLR LEIGSAYTIL FLLMTLPLLV AMQRLGVEAP GARDGARQRR
|
|---|
| |