Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2239 |
Symbol | hfq |
ID | 3848487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 2517335 |
End bp | 2517574 |
Gene Length | 240 bp |
Protein Length | 79 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637841908 |
Product | RNA-binding protein Hfq |
Protein accession | YP_442760 |
Protein GI | 83719805 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.245195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA AAGGGCAATT GTTACAAGAC CCGTTTTTGA ACGCACTGCG TAAAGAGCAC GTGCCGGTTT CGATCTATCT CGTGAACGGC ATCAAGCTCC AAGGGAACAT CGAATCGTTC GACCAGTACG TCGTGTTGCT CCGGAACACG GTTACCCAGA TGGTTTACAA GCACGCCATT TCGACGGTCG TGCCGGCGCG TCCGGTGAAC TTCCACCCGG ATGCGGAAGC AGCGTCCTAA
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Protein sequence | MSNKGQLLQD PFLNALRKEH VPVSIYLVNG IKLQGNIESF DQYVVLLRNT VTQMVYKHAI STVVPARPVN FHPDAEAAS
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