Gene BTH_I1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1790 
Symbol 
ID3850103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp2006680 
End bp2007174 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID637841459 
ProductRrf2 family protein 
Protein accessionYP_442322 
Protein GI83720448 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.034935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCACGTA TGCGACTCTC TGAATATACG GACTACACGC TGCGCGTGCT GATGTACTGC 
GCGTCGAATC CGGACCGGCT CATCACGATC GCGGAGCTCG CCGAGCGCCA CGACGTGTCG
AAGAATCATC TGACGAAGAT CGTCAACAGC CTCGCGCGCC AGGGCACGCT GGAGACGACG
CGCGGTCGCG GTGGCGGCGT GCGTCTCGCG CTGCCGCCCG AGCGCATCGG CATCGGCGAC
GTGATTCGCT CGTCCGAAAC GGATTTCCGT CTCGTCGAGT GCTTCGACCG GAACACGAAC
ACGTGCATGC TCGCCGCGAA GTGCCGGCTC GAGCGGCTGC TCGACAGCGC ACTGCGTGCG
TACTTCAAGG AGCTCGACGG CGCGACGCTC GCGGATCTCG TCGGCCCGCC GCCGAAGAAC
GGATTGAGCG CGGCCGAAAG GACGCACGAA TTCGCGGTCG CGATGCCGTC GAAGTCGATC
GCGCGCGCGC GATGA
 
Protein sequence
MPRMRLSEYT DYTLRVLMYC ASNPDRLITI AELAERHDVS KNHLTKIVNS LARQGTLETT 
RGRGGGVRLA LPPERIGIGD VIRSSETDFR LVECFDRNTN TCMLAAKCRL ERLLDSALRA
YFKELDGATL ADLVGPPPKN GLSAAERTHE FAVAMPSKSI ARAR