Gene BTH_I1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1471 
Symbol 
ID3849950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand+ 
Start bp1666654 
End bp1667205 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID637841143 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_442017 
Protein GI83720588 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.992571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCC AAGTAACTGC TACCGCTTTA CCGGAAGTCA AGATCATCGA GCCGAAGGTG 
TTCGGCGACG CTCGCGGGTT CTTTTTCGAG AGTTTCAATG CTCGGGAATT TTCGGAACTC 
GTCGAGCCGG GCGTCGAATT CGTTCAGGAC AATCATTCCC GATCCGCCCG CGGCGTGCTT 
CGCGGTCTGC ACTATCAAAT TCAGCACGCG CAAGGGAAAC TCGTGCGTGT AGTCGACGGC 
GAAGTGTTCG ACGTTGCGGT CGACGTCCGC AGGAGTTCGC CCAATTTCGG CAAGTGGGTC 
GGCGTACGGC TCTCTGCGGA GAACAAGCGG CAGCTTTGGG TGCCGGCGGG CTTCGCGCAT 
GGCTTCGTTG TACTGAGCGA ATCGGCGGAT TTTCTGTACA AGACGACCGA CTATTGGTAT 
CCGGAGTTCG AGCGCAGCAT CCTTTGGAGC GACGAGCAAA TCGGTATCGA ATGGCCGATT 
GATCGGGAGC CGCTTGTTGC CGCGAAGGAT GCGGCAGGCA AGACGCTGAG CGAAGCCGAG 
GTCTATGCAT GA
 
Protein sequence
MAIQVTATAL PEVKIIEPKV FGDARGFFFE SFNAREFSEL VEPGVEFVQD NHSRSARGVL 
RGLHYQIQHA QGKLVRVVDG EVFDVAVDVR RSSPNFGKWV GVRLSAENKR QLWVPAGFAH 
GFVVLSESAD FLYKTTDYWY PEFERSILWS DEQIGIEWPI DREPLVAAKD AAGKTLSEAE 
VYA