| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1421 |
|---|
| Symbol | |
|---|
| ID | 3847761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1603959 |
|---|
| End bp | 1605800 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637841093 |
|---|
| Product | serine-type carboxypeptidase family protein |
|---|
| Protein accession | YP_441967 |
|---|
| Protein GI | 83719333 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAC AGAAGTCCTT GAAAGACGGT TTCGCGCTTG GATTGTGCAG GGCGGCACGG
CCGGTCGCCG CTGCCGCGCT CGCCGCGCTG CTCGTCGCCG CGTGCGGCGG CGACGACGGC
GGCGGCGGCC CGTCGCTCGC GGCCGCGAAC GTCGCAAACA CGAGCACGTC GACGAACGCG
ACAGCCGCCG GCGCGGCGAA TAATGCGGCG CTCCCGCCGG ATCAACCGTA TATCGACAAC
GATGTCTACG GCACCGGGCC GAACGACGCG GTCACCGACG CGACGGAGGG CGCGGCGGTC
GTGCACCGGC AGGTGAAGAT CGGCGACCAG ATCCTCACCT ACACGGCGAC GGCCGGCCAC
CTCGTGACGA TCGATCCGGT CACGTCGAAG CCGAACGCGA AGATGTTCTA CGTCGCATAC
ACGCTCGACA ATCCGAATCC GAGCAAGCCG CGCCCCGTTA CGTTCTTCTA CAACGGCGGC
CCGGGCTCGT CGTCGGTGTA CCTGCTGCTC GGTTCGTTCG GACCGAAGCG CTTGCAGTCG
TCGTTCCCGA ACTTCACGCC GCCCGCGCCG TACCGGTTGC GCGACAACCC CGAGAGCCTG
CTCGACCGCT CGGACCTCGT GTTCATCAAC CCGGTCGGCA CCGGCTACTC GGCCGCGATC
GCACCGGCGA AGAACAAGGA TTTCTGGGGC GTCGACCAGG ACGCGCACTC GATCGACCGC
TTCATCCAGC GCTACCTGAC GAAGTACGCG CGCTGGAACT CGCCGAAGTT CCTGTTCGGC
GAGTCGTACG GCACGGCGCG CAGCGCGGTG ACGTCGTGGG TGCTGCATGA GGACGGCATC
GAGCTGAACG GGATCACGCT CCAGTCGTCG ATTCTCGACT ACGCGAACGC GGTGAGCGCG
ATCGGCATCT TCCCGACGCT CGCGGCCGAT GCGTTCTACT GGAACAAGAC GACCATCAGC
CCGAAACCGG CCGATCTGGA CGCGTACATG GCGCAGGCGC GCAGCTACGC GGACAACGTG
CTCGCGCCGC TCGCGCAGGC GCCGAATCCG CAGGACGGCG GCTTCGTCAA CGTGCGGCTG
AACCTGAACC TCGCGGCCGC GCAGCAGATG GGCGCGTACA TCGGCACCGA TCCGGTTTCG
CTGATCCAGA CGTTCGGCAA TCCGGCCGCG CTCGGCAACG TGCCGTCGTC CGACGACAAC
CCGCCGTACA CGTTCTTCCT GACGCTCGTG CCGGGCGTCC AGATCGGCCA GTACGACGGG
CGCGCGAACT ACACGGGCAA GGGCATCGCG CCGTACATCC TGCCGAACTC GGGCAGCAAC
GATCCGTCGA TCAGCAACGT CGGCGGCGCG TACACGGTGC TGTGGAACGA CTACATCAAC
AACGACCTGA AGTACGTGTC GACGTCGTCG TTCGTCGATC TGAACGACCA GGTGTTCAAC
AACTGGGACT TCAGCCACAC GGACCCGACG GGCGCGAACC GCGGCGGCGG CAATACGCTG
TATACGGCGG GCGATCTCGC CGCGACGATG AGCCTGAATC CGGACCTGAA GGTGTTGTCG
GCGAACGGCT ATTTCGACGC GGTGACGCCG TTCCACCAGA CCGAGCTCAC GCTGCAGCAG
ATGCCGCTCG ATCCGTCGAT CAAGTCGGCG AACCTGACGA TGAAATACTA TCCGTCGGGC
CACATGATCT ATCTGAACGA TAACTCGCGG ATCGCGATGA AGGCGGATCT CGCGACGTTC
TACGACGGCA TCCTCACGGA TCGCAAGGCG CTGCAACGCG TGCTGCTGCG TCAGCAGAAG
GCGCTGCAGT TAAAGCAACA GAAGCAACAG CAAGGGCAGT GA
|
|---|
| Protein sequence | MKIQKSLKDG FALGLCRAAR PVAAAALAAL LVAACGGDDG GGGPSLAAAN VANTSTSTNA
TAAGAANNAA LPPDQPYIDN DVYGTGPNDA VTDATEGAAV VHRQVKIGDQ ILTYTATAGH
LVTIDPVTSK PNAKMFYVAY TLDNPNPSKP RPVTFFYNGG PGSSSVYLLL GSFGPKRLQS
SFPNFTPPAP YRLRDNPESL LDRSDLVFIN PVGTGYSAAI APAKNKDFWG VDQDAHSIDR
FIQRYLTKYA RWNSPKFLFG ESYGTARSAV TSWVLHEDGI ELNGITLQSS ILDYANAVSA
IGIFPTLAAD AFYWNKTTIS PKPADLDAYM AQARSYADNV LAPLAQAPNP QDGGFVNVRL
NLNLAAAQQM GAYIGTDPVS LIQTFGNPAA LGNVPSSDDN PPYTFFLTLV PGVQIGQYDG
RANYTGKGIA PYILPNSGSN DPSISNVGGA YTVLWNDYIN NDLKYVSTSS FVDLNDQVFN
NWDFSHTDPT GANRGGGNTL YTAGDLAATM SLNPDLKVLS ANGYFDAVTP FHQTELTLQQ
MPLDPSIKSA NLTMKYYPSG HMIYLNDNSR IAMKADLATF YDGILTDRKA LQRVLLRQQK
ALQLKQQKQQ QGQ
|
|---|
| |