| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1397 |
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| Symbol | hmgA |
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| ID | 3846832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 1571201 |
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| End bp | 1572553 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637841069 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_441943 |
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| Protein GI | 83719016 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.762264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGAA CGACAATCAT GACACTGGAT TTTTCGAAAC CGGGCGAAGC CGGCTATCAG
AGCGGCTTCG CGAACGAATT CGCGACCGAG GCGCTGCCGG GCGCGCTGCC GCACGCGCGC
AACTCGCCGC AGCGCGCGCC GTACGGGCTC TACGCGGAGC AGTTGTCCGG CACCGCGTTC
ACCGCGCCGC GCGGCCATAA CCGCCGCTCG TGGCTGTACC GCATCCGGCC CGCCGCCGTG
CATCGGCCGT TCGAGCTCGT GTCCGGCGAG CGCCGGATCG TCGCCGATTT CGGCGATTCG
GGCGACGTGC CGCCGACGCC GCCGAACCAG TTGCGCTGGG ACCCGCTGCC GATGCCCGCG
CAGCCGACCG ATTTCGTCGA CGGCTGGGTG ACGATGGCGG GCAACGGCTC GGCCGCCGCG
ATGAGCGGCT GCGCGATCCA TCTGTACGCG GCGAACCGCT CGATGCGCGA GCGCTTCTTC
TACAGCGCGG ACGGCGAACT GCTGATCGTG CCGCAGGAAG GGCGGCTTTT CATCATGACG
GAGCTCGGAC GGCTCGACGT CGAGCCGTTC GAGATCGCGG TGATTCCGCG CGGCGTGCGC
TTCGCGGTCG CGCTGCCCGA CGGGCGCGCG CGCGGCTATG TCTGCGAGAA CTTCGGCGCG
CTGCTCAGGC TGCCGGATCT CGGGCCGATC GGCTCGAACG GCCTGGCGAA TCCGCGCGAC
TTCCTGACGC CGAACGCGTC GTACGAGGAT CGCGAAGGCG CGTTCGAGCT CGTCGCGAAG
TTGAACGGCC GGCTCTGGCG CGCGGACATC GACCATTCGC CGTTCGACGT CGTCGCATGG
CACGGCAACT ACGCGCCGTA CAAGTACGAC CTGCGTCACT TCAACACGAT CGGCTCGATC
AGCTACGATC ATCCGGACCC GTCGATCTTC CTCGTGCTGC AGTCGCAAAG CGATACGCCG
GGCGTCGACG CGATCGACTT CGTGATCTTC CCGCCGCGCT GGCTCGCGGC CGAGGATACG
TTCCGCCCGC CGTGGTTCCA CCGCAACGTC GCGAGCGAGT TCATGGGGCT CGTGCACGGC
GTCTACGACG CGAAGGCGGA AGGCTTCGTG CCGGGCGGCG CGAGCCTGCA CAACTGCATG
TCGGGCCACG GGCCGGATGC GGACACGTTC GAGAAGGCGT CGGCGATCGA TACGTCGAGG
CCGAACAAGG TCGGCGACAC GATGGCGTTC ATGTTCGAGA CCCGCACGCT GATCCGGCCG
ACGCGCTTCG CGCTCGATAC CGCGCAACTG CAGGCGAACT ACTTCGAATG CTGGCAAGGC
CTCAAGAAAC ATTTCAATCC GGAGCAACGA TGA
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| Protein sequence | MERTTIMTLD FSKPGEAGYQ SGFANEFATE ALPGALPHAR NSPQRAPYGL YAEQLSGTAF
TAPRGHNRRS WLYRIRPAAV HRPFELVSGE RRIVADFGDS GDVPPTPPNQ LRWDPLPMPA
QPTDFVDGWV TMAGNGSAAA MSGCAIHLYA ANRSMRERFF YSADGELLIV PQEGRLFIMT
ELGRLDVEPF EIAVIPRGVR FAVALPDGRA RGYVCENFGA LLRLPDLGPI GSNGLANPRD
FLTPNASYED REGAFELVAK LNGRLWRADI DHSPFDVVAW HGNYAPYKYD LRHFNTIGSI
SYDHPDPSIF LVLQSQSDTP GVDAIDFVIF PPRWLAAEDT FRPPWFHRNV ASEFMGLVHG
VYDAKAEGFV PGGASLHNCM SGHGPDADTF EKASAIDTSR PNKVGDTMAF MFETRTLIRP
TRFALDTAQL QANYFECWQG LKKHFNPEQR
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