Gene BTH_I1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1292 
Symbol 
ID3848497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp1444529 
End bp1445938 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content71% 
IMG OID637840964 
Productglycolate oxidase, subunit GlcD, putative 
Protein accessionYP_441839 
Protein GI83719815 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCACC CCGCTCCGCC GCCGCATCGC CCGCTTCCCA CCGCCTTCGT CGACGCGCTC 
GCCGCCCGGT TCGGCGCGCG CATGTCGGTC GCGCAGGCGG TGCGCGCCCA TCACGGCCGC
GACGAGTCGC CGTTCGATCC GCAACTGCCC GACGCCGTCG TGTTCGCGCA CACGGCCGAC
GACGTGCGCG ACGTCGTCCT TCTCTGCGCG CGGCACGACG TGCCGCTGAT CCCGTACGGC
GTCGGCTCGT CGCTCGAAGG CCATCTGCTC GCGGTGCGCG GCGGCGTGTC GCTCGATCTG
TCGGAGATGA ACCGCGTGCT GTCGATCGAC GCCGACGATC TCACCGCGAC CGTCGAGCCC
GGGCTCACGC GCCGCGCGCT GAACGACGCG CTGCGCGACA CGGGCCTCTT CTTCCCGATC
GATCCGGGCG CGGACGCGAG CATCGGCGGG ATGACCGCGA CGCGCGCGTC GGGCACGAAC
GCGGTGCGCT ACGGCACGAT GCGCGAGAAC GTGCTCGGCC TCACCGCCGT GCTCGCCGAC
GGCCGGGTCG TGAAGACGGG CACGCGCGCG CGCAAATCGT CGGCGGGCTA CGATCTCACG
CGGCTTTTCG TCGGCTCCGA AGGCACGCTC GGCGTGATCA CCGAGATCAC GCTGCGCCTG
CACCCGCTGC CCGAGGCCGT GTCGGCCGCC GTGTGCGCCT TCCCGTCGAT GAGCGCCGCC
GCGCGCACCG TGATCGAGAC GATTCAGATC GGCGTGCCGA TCGCGCGCGT CGAATTCGTC
GACGCGCTCG CGGTGCGCGC GATCAACCGC AACGCGCAGC TCGGGCTCGC CGAGGCGCCG
ACGCTCTTCT TCGAATTCCA CGGCACCGAA TCCGGCGTGC GCGAGCAGGC TCAGCAAGTC
GAGGCGCTCG CCGAGCAGAA CGGCGGCCAG GGCTTCGAAT GGGCGACGCG GCCCGAGGAT
CGCACGCGCC TCTGGTCCGC GCGCCACCAC GCGTATTTCT CGATGCTGCA ACTGAAGCCC
GGCTGCCGCG CGGTGACGAC CGACGTCTGC GTGCCGATCT CGCAGCTCGC CGCGTGCGTC
GAGGAAACCG AAGCCGACCT GAACGCGTCG TCGCTGCCGT GCCCGATCGT GGGCCACGTC
GGCGACGGCA ACTTCCACGT CGCGATCCTC GTCGATCCGG CCAAGCCCGA GGAGCTCGCC
GAAGCCGAGG CGCTCAACGA CCGGATCGTC GAGCGCGCGC TGCGCATGGG CGGCACCTGC
ACGGGCGAGC ACGGCGTCGG GCTGCACAAG ATGCGCTTTC TCGCGGCCGA GCACGGCGAG
AACGCGGTCG ACGCGATGCG CGCGATCAAG CGCGCGCTCG ATCCGCGCAA CCTGATGAAC
CCCGGCAAGA TCTTCACGAT CGACGCATGA
 
Protein sequence
MNHPAPPPHR PLPTAFVDAL AARFGARMSV AQAVRAHHGR DESPFDPQLP DAVVFAHTAD 
DVRDVVLLCA RHDVPLIPYG VGSSLEGHLL AVRGGVSLDL SEMNRVLSID ADDLTATVEP
GLTRRALNDA LRDTGLFFPI DPGADASIGG MTATRASGTN AVRYGTMREN VLGLTAVLAD
GRVVKTGTRA RKSSAGYDLT RLFVGSEGTL GVITEITLRL HPLPEAVSAA VCAFPSMSAA
ARTVIETIQI GVPIARVEFV DALAVRAINR NAQLGLAEAP TLFFEFHGTE SGVREQAQQV
EALAEQNGGQ GFEWATRPED RTRLWSARHH AYFSMLQLKP GCRAVTTDVC VPISQLAACV
EETEADLNAS SLPCPIVGHV GDGNFHVAIL VDPAKPEELA EAEALNDRIV ERALRMGGTC
TGEHGVGLHK MRFLAAEHGE NAVDAMRAIK RALDPRNLMN PGKIFTIDA