Gene BTH_I1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1044 
Symbol 
ID3847003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand- 
Start bp1185091 
End bp1185651 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content63% 
IMG OID637840716 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_441598 
Protein GI83718468 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0908239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAG ACAAGGAACT CGCGGACTTT CTGGCGGGCG TCGAAAGGCG CGCGTTCAAG 
CAGGCTGCAT ACGCGGTGCG CGACGACGAC GCGTCGCTCG ACATCGTGCA GGACGCGATG 
ATCCGGCTCG CGGAGAAATA CGGCGACCGC CCGGCCGCCG AACTGCCGCT GCTTTTTCAA 
CGGATCCTTC AGAACGCGAT CCACGACTAT TTCCGCAGAC AAAAGGTGCG CAACACCTGG 
GTCAGCCTGT TCTCGTCGCT GAACAACACC GACGACGACG AGTTCGACCC GCTCGAGACG 
CTCGAGTCGG CGGATGGCGA CGGCGTCGAG AGCGGCGAGA CGCGGCTCGA GCGCGAGCAG 
GTGCTCGCGC TCATCGACGA TGAAATCCAG AAGCTTCCGG CGCGTCAACG GGAAGCCTTC 
CTGATGCGTT ATTGGGAGGA TATGGATGTC GCCGAGACAG CCGCCGCCAT GGGGTGTTCG 
GAGGGCAGCG TCAAGACGCA CTGCTCCCGG GCCACTCATG CATTGGCGTC GGCGCTCAAG 
GCCAAAGGAA TCACGCTATG A
 
Protein sequence
MASDKELADF LAGVERRAFK QAAYAVRDDD ASLDIVQDAM IRLAEKYGDR PAAELPLLFQ 
RILQNAIHDY FRRQKVRNTW VSLFSSLNNT DDDEFDPLET LESADGDGVE SGETRLEREQ 
VLALIDDEIQ KLPARQREAF LMRYWEDMDV AETAAAMGCS EGSVKTHCSR ATHALASALK 
AKGITL