| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3826 |
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| Symbol | pdp |
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| ID | 2856702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 3914807 |
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| End bp | 3916111 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637515243 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_038145 |
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| Protein GI | 49480320 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000000962839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATGG TGGACCTAAT TGCAAAAAAA CGTGACGGAC ATGCATTAAC GACAGAAGAA
ATTGACTTTA TTGTTGAAGG ATATACAAAT GGTGATATTC CTGATTATCA AGTAAGTTCA
CTTGCAATGG CAATTTTCTT CCAAGATATG AACGATCAAG AACGTGCAGA TTTAACGATG
GCAATGGTAA ATAGTGGTGA TACAATCGAC TTATCAGCTA TTGAAGGTGT AAAAGTAGAT
AAGCACTCAA CAGGTGGCGT TGGTGATACA ACGACACTTG TATTAGGTCC ATTAGTAGCC
GCTTTAGGTG TACCGGTTGC AAAAATGTCT GGACGTGGTC TAGGACATAC TGGCGGTACA
ATTGATAAAT TAGAAGCAGT TCCAGGGTTC CATGTTGAAA TCGAAAATGA TGAATTCATG
CGTCTTGTAA ATGAAAATAA AATCGCAGTT ATTGGTCAGA GTGGAAACTT AACACCTGCG
GATAAAAAGT TATATGCACT CCGTGATGTA ACGGCAACAG TAAACTCAAT TCCGCTTATT
GCAAGCTCGA TTATGAGTAA AAAAATTGCT GCTGGTGCAG ATGCAATTGT TCTTGATGTA
AAAACTGGAG CAGGTGCATT TATGAAAACG GATGAAGATG CAAAACGTTT AGCAGAAGCA
ATGGTACGCA TTGGTAATAA CGTTGGTCGT AATACGATGG CTGTTATTTC TGATATGAGT
CAACCACTTG GTGAGGCTAT TGGTAACGCA CTTGAAGTAC AAGAAGCAAT TGATACATTA
CAAGGTAAAG GACCGAAAGA TTTAGAAGAG TTATGTTTAA CACTTGGAAG TCAAATGGTA
TACCTTGCTG GACAAGCTTC ATCTTTAGAA GATGCGCGTG AGAAATTAAT TGAAGTAATG
AACAACGGTA AAGCGCTAGA ATCATTTAAA ACATTCTTAT CAGCGCAAGG CGGCGATGCA
TCTGTTGTTG ATGATCCTTC TAAATTACCA CAAGCACAAT TTAAAATTGA AGTGGAAGCG
AAGGAAGACG GTTATGTATC AGAAATCGTT GCAGATGAAA TTGGAACAGC AGCAATGCTT
TTAGGAGCAG GGCGTGCGAC GAAGGAATCT GAAATTGATT TAGCAGTTGG CTTAATGCTT
CGCAAAAAAG TAGGGGACAG CGTGAAAAAA GGTGAATCCC TTGTTACCAT TTACGCAAAC
CGTGAAAATG TAGAAGATGT AAAAGCAAAA ATTTATGAGA ACATGAAGAT CTCTAAAGAG
CATGTAGATG CACCGACATT AGTGCATGGC ATCGTTACTG AATAA
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| Protein sequence | MRMVDLIAKK RDGHALTTEE IDFIVEGYTN GDIPDYQVSS LAMAIFFQDM NDQERADLTM
AMVNSGDTID LSAIEGVKVD KHSTGGVGDT TTLVLGPLVA ALGVPVAKMS GRGLGHTGGT
IDKLEAVPGF HVEIENDEFM RLVNENKIAV IGQSGNLTPA DKKLYALRDV TATVNSIPLI
ASSIMSKKIA AGADAIVLDV KTGAGAFMKT DEDAKRLAEA MVRIGNNVGR NTMAVISDMS
QPLGEAIGNA LEVQEAIDTL QGKGPKDLEE LCLTLGSQMV YLAGQASSLE DAREKLIEVM
NNGKALESFK TFLSAQGGDA SVVDDPSKLP QAQFKIEVEA KEDGYVSEIV ADEIGTAAML
LGAGRATKES EIDLAVGLML RKKVGDSVKK GESLVTIYAN RENVEDVKAK IYENMKISKE
HVDAPTLVHG IVTE
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