| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_3083 |
|---|
| Symbol | |
|---|
| ID | 2858777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 3154033 |
|---|
| End bp | 3155229 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637514504 |
|---|
| Product | multidrug-efflux protein |
|---|
| Protein accession | YP_037406 |
|---|
| Protein GI | 49480602 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0261519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGC GTTTTACTTT TTGGATTATG GTTGGGATTG TAGCAATCTC GGGTTTGTCA
CAAGGGATGC TTTTACCGGC CATTGCAATG ATTTTTGAAC AAGAAGGGGT AAGTTCAAGT
ATTAACGGTA TTCATGCGAC AGCGCTATAC ATTGGGATAT TAGTTATTTC CCCGTTTCTT
GAAAAACCGA TGCAAAAGTT TGGAATGAAG CCAATTATTG TGATTGGTGG GTTTCTCGTT
ATCATTTCAT TATTCTTTTT TACACAAACC TTTTCATTCT GGGTATGGTT TATCCTTAGA
TTTCTAGTTG GAGTCGGAGA TCATATGCTT CATGTCGGAA CACAAACATG GATTACGACA
ACATCAGACC CGAGTAAAAT AGGGAGACAA GTATCGATAT ACGGTGTATT CTTCGGAATT
GGTTTTGCCG TCGGTCCGTA TTTAGCAAGC ACTGTTCAAT ACGGTCTTGC AACGCCATTT
ATTATATCTA CTATACTTTG TTTAATAGGT TGGCTGTTAC TATTACCAAC AAAAAATGCA
TTCCCAGCGC AAGATGAAAG AGAAGTGAAG CGTGAATCAT CATTTTCTCG TTATAAACAA
GTTGTTGGAT TAGGATGGAT TGCATTACTG GGACCACTTG CATATGGCGT ACTGGAAGCG
ATGTTAAATA GTAACTTACC AGTATACGCG CTTCGAAAAG GATGGTCCGT CTCAGAAGTA
TCCTTCTTAT TGCCAGCGTT TGCAGTTGGG GGTATTATTA CACAAATTCC GCTCGGTATA
TTAAGTGACA AATACGGAAG GGATCGTATT TTAACGTGGA CGTTCTGCAT AAGTACGGGC
ATTTTCTTGC TTGCAGCCGT ATTTGATCAA TATTACTGGA TCGTCTTTGC CTGTATGCTA
TTAGCGGGTA TGGTCATTGG ATCGTGCTTC TCTTTAGGAC TTGGATTTAT GACAGATTTA
TTACCGAGGC ACTTATTGCC AGCAGGTAAT ATATTATCTG GAATCGCCTT TAGTTTAGGA
AGTATACTGG GACCTGTATT AGGAGGCGTA TTTATAGAAA AAATACAGTA TACAAGCTTT
TTTATTGCGG TTATGATTAT AATAGGAACT CTCGCAATAT TATATATGAT CTACATGAAG
AATCAATTTG CATCAAGAAA AATAGAAAGT AGGTTAGGGC ATGACAAAAC AACCTAA
|
|---|
| Protein sequence | MSMRFTFWIM VGIVAISGLS QGMLLPAIAM IFEQEGVSSS INGIHATALY IGILVISPFL
EKPMQKFGMK PIIVIGGFLV IISLFFFTQT FSFWVWFILR FLVGVGDHML HVGTQTWITT
TSDPSKIGRQ VSIYGVFFGI GFAVGPYLAS TVQYGLATPF IISTILCLIG WLLLLPTKNA
FPAQDEREVK RESSFSRYKQ VVGLGWIALL GPLAYGVLEA MLNSNLPVYA LRKGWSVSEV
SFLLPAFAVG GIITQIPLGI LSDKYGRDRI LTWTFCISTG IFLLAAVFDQ YYWIVFACML
LAGMVIGSCF SLGLGFMTDL LPRHLLPAGN ILSGIAFSLG SILGPVLGGV FIEKIQYTSF
FIAVMIIIGT LAILYMIYMK NQFASRKIES RLGHDKTT
|
|---|
| |