Gene BT9727_3026 details

Gene Information

• Locus tag: BT9727_3026
• Symbol: sigM
• ID: 2855591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus thuringiensis serovar konkukian str. 97-27
• Kingdom: Bacteria
• Replicon accession: NC_005957
• Strand: -
• Start bp: 3108814
• End bp: 3109314
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637514447
• Product: RNA polymerase sigma factor SigM
• Protein accession: YP_037349
• Protein GI: 49478105
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family; [TIGR02950] RNA polymerase sigma factor, SigM family

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 0.336041
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTG AAGAAATATA TAAGGTTTAT ATAAACGATG TGTATCGGTA TTTATTTTCC 
CTTTCTCGTA GCCATCATGT AGCGGAGGAC TTGATGCAGG AGACTTTTTA TCGGGCGTAT 
CTTTATCTAG AAGATTATGA AAATCAAAAG GTAAAATCAT GGCTTTTTAA AGTGGCGTAT 
CATACGTTTA TTGATTTTGT TAGGAAAGAG AGAAAAGTGT CTTTTGTAGG AACGGAGGAA 
TTAGAGACAA TACAAGCCGG TGAATCTACA GAAGAGTATG TAGTCGCAAA AAATAGTTAC 
GAAAAATTAA TTCAGATTAT TCATACTTTA CCTGTGATAG AGGCGCAAGC TATTTTATTA 
TGTGACGTAC ATGAATTAAC GTACGAAGAG GGTGCTTCTG TATTAGATTT AAAGTTAAAC 
ACGTATAAAA GTCACATATT TCGTGGGAGA AAAAGATTAA AACAATTATT AAAGGAGGAA 
AAGAGTCAAA ATGACAAATG A 

 

Protein sequence

MEIEEIYKVY INDVYRYLFS LSRSHHVAED LMQETFYRAY LYLEDYENQK VKSWLFKVAY 
HTFIDFVRKE RKVSFVGTEE LETIQAGEST EEYVVAKNSY EKLIQIIHTL PVIEAQAILL 
CDVHELTYEE GASVLDLKLN TYKSHIFRGR KRLKQLLKEE KSQNDK