| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_2548 |
|---|
| Symbol | opuAB |
|---|
| ID | 2853880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 2630134 |
|---|
| End bp | 2630970 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637513972 |
|---|
| Product | glycine betaine/L-proline ABC transporter, permease |
|---|
| Protein accession | YP_036874 |
|---|
| Protein GI | 49479143 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.000537684 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGTA TTCCGCGTAT TCCATTAGGG GAATGGGTTG ATTCATTTGT TGCAAGTTTA
TATGAGCACT TTGAAGGCTT GTTCCGAGTA TTCTCTTATA TTATTGGAGG ATTCGTTGAT
TTACTCACTA ATTTTTTAAT AATAATACCG GCCATATTGA TGATTATTTT ACTGTGTTTC
CTCATTTGGT ACACAACGAG AAAAGTATCT TTAGTTATTT TTACACTGAT CGGATTATTA
TTTATTTTAA ATATTAACTA CTGGGCACAG ACGATGCAAA CATTAGCACT TGTACTTACT
TCCGTTATTA TTTCAATTAT TGTTGGAATT CCAATTGGGA TATTAGCATC TCAAAATGAG
CGTTTCTCAA AATTTTTAAA ACCGACATTA GATTTTATGC AGACAATGCC GGCTTTCGTA
TATCTGATTC CTGCGATTAC ATTTTTCGGA GTAGGAGTAG TACCTGGGAT TATTGCATCA
GTAATCTTTG CAATGCCACC GACAATTCGT TTTACTGATT TAGGAATTAG ACAAGTTCCA
GAAGATTTAA TAGAAGCAGC GAATGCATTT GGTTCAACCG CATCACAAAA ACTATTTAAA
GTACAATTAC CACTTGCAAC TGGAACGATT ATGGCTGGTG TGAATCAAAG CATTATGCTT
TCTTTATCTA TGGTAGTAAC AGCATCTCTT GTAGGAGCAC CAGGTCTTGG GGTTGATGTA
TACCGCTCTG TAACACAAGT TAATATCGGA ATGGGATTTG AAGCCGGACT AGCTATTGTT
GTCATTGCGA TTATATTAGA CCGCATTACA CAAGGATTTC ATCAAAAAAG AAGATAA
|
|---|
| Protein sequence | MNSIPRIPLG EWVDSFVASL YEHFEGLFRV FSYIIGGFVD LLTNFLIIIP AILMIILLCF
LIWYTTRKVS LVIFTLIGLL FILNINYWAQ TMQTLALVLT SVIISIIVGI PIGILASQNE
RFSKFLKPTL DFMQTMPAFV YLIPAITFFG VGVVPGIIAS VIFAMPPTIR FTDLGIRQVP
EDLIEAANAF GSTASQKLFK VQLPLATGTI MAGVNQSIML SLSMVVTASL VGAPGLGVDV
YRSVTQVNIG MGFEAGLAIV VIAIILDRIT QGFHQKRR
|
|---|
| |