| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_1214 |
|---|
| Symbol | afuB |
|---|
| ID | 2857927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 1303615 |
|---|
| End bp | 1305366 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637512647 |
|---|
| Product | iron ABC transporter permease |
|---|
| Protein accession | YP_035549 |
|---|
| Protein GI | 49480072 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR03262] putative 2-aminoethylphosphonate ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAG ATTTAAAGGT AGAAAATACG AAAAAAAAGA TTAAGAGACG TATCGGTAAA
GAAGAGTGGA TACAAAGACT ATTAATTATT GGTATGATCC TTGCCTTTTT GATTATGCTT
GTATTGCCGC TATTACAACT ATTTACACAA GCTTTTTATG ATAAAGATGG AGCTTTCATT
GGTGTTGCGA ATTTCAGTAA ATATTTCACA ACACCAACGC TAGTTCAATC ATTACAAAAT
ACGGTATGGA TTTCGGGTGC GACAACAATT ATTGCAGTGA CACTCGCTTT TGCTTACGCC
TATGCGATCG CTCGTACGAA TGTATTTGGA AAGCGTGTAT TTCAATACAT CGCGTTGTTA
CCATTGTTCG CACCAACGAT GATGCATGGT ATCGCACTTA CATATTTATT TGGTAATCAA
GGATTAGTAA CGAAGGGGAT GTTTGGCTTA TTTGAAGGTA TACAAATCCC TTTATATGGA
CCAGTAGGAA TTGTAATGGC TGAAGTCATG TATACATTTC CGCAAGCATT TCTTATATTA
TTAATTGCTT TCCAAGGTTC TGATTATCGT TTATATGAAG CTTCTAATAT GTTGGGAGCG
AGTAAAACAA AGCAATTTTT CACTGTTACT TTACCTAGTG TAAAGTACGG ATTAATTAGT
GCGATGTTCG TTGTGTTTAC ACTCAGCTTC ACTGATTTTG GCGCACCAAA AATTGTTGGT
GGGCAATATA ATGTACTTGC TACCGACGTA TATAAGCAAG TAATCGGACA ACAAAATATG
CCGATGGGTG CAACTGTCGG AATGATTTTA TTAATTCCAG CTATATTTGC ATTTGCAGTT
GATCGCATTA CGCAAAGAAA GCAGGCAAAT TTCTTATCTT CCAAAGCAGT GCCATATAGA
ATAACGGCTA ATAAGAAAAG AGATGTAGTC TCATTCATAT ATTGTAGTGT CATTACACTT
ATGATTGTTC TTTTATTTGT GGCAGTTGGT ATTGCTGCAA GTGTGAAAGT ATGGCCATAT
AATATGAGTT TTACATTTGA GCATTTTAAT TTTTCGAGTT TAACAGGAGA TGGACTTGAA
GCATTTAAAA ATAGTGTAAT TGTCTCAGCA GTTACAGCAG TTATTGGGGC AATTTTAACA
TTTATGTTCG CATATGCGAT TGAGAAAATA GATCAGCTAA AGTTTTTCCG AAAAACAGGC
TACTTTTTCT CGATTGTACC TTTAGCAATC CCAGGTCTAG TACTTGGATT GGGATATGTC
TTTTTCTTTA GTCAACCAAC GATTCAAATA TTTGGACTTT CAGTAACGAA TCCGTTTCAT
TCTTTATACG GAACAATTGC TGTGCTAGTA CTAGTAAACA TCATTCATTT TTATTCGGTA
ACATTCGTTA CTGCAACGAC TGCTTTAAAG AAATTAGACC GAGAGTTTGA GCTTGTTTCG
CAGTCGATGG GCATTCCGTT TTATAAAACA TTCTTTAGAG TAACAGTACC GATGTGTTTA
CCAGCAATTT TAGAAATGGT GATGTACTAT TTCGTCAATT CGATGGTAAC TGTGTCAGCG
GTTGTATTCT TATACGCAGC TGATTTTAAA CTAGCTGCCG TATCAATCGT AAATATGGAT
GATGCAGGAA ATGTAGCGCC GGCAGCTGCA ATGAGTGTAC TTATTGTTGT TACAAATATT
GTAGTGAGAG TTGTATATGA ATGGGGAACG AAAGCACTTC GTAACCGAAC TTCACAATGG
CAAAAAAGAT AA
|
|---|
| Protein sequence | MLEDLKVENT KKKIKRRIGK EEWIQRLLII GMILAFLIML VLPLLQLFTQ AFYDKDGAFI
GVANFSKYFT TPTLVQSLQN TVWISGATTI IAVTLAFAYA YAIARTNVFG KRVFQYIALL
PLFAPTMMHG IALTYLFGNQ GLVTKGMFGL FEGIQIPLYG PVGIVMAEVM YTFPQAFLIL
LIAFQGSDYR LYEASNMLGA SKTKQFFTVT LPSVKYGLIS AMFVVFTLSF TDFGAPKIVG
GQYNVLATDV YKQVIGQQNM PMGATVGMIL LIPAIFAFAV DRITQRKQAN FLSSKAVPYR
ITANKKRDVV SFIYCSVITL MIVLLFVAVG IAASVKVWPY NMSFTFEHFN FSSLTGDGLE
AFKNSVIVSA VTAVIGAILT FMFAYAIEKI DQLKFFRKTG YFFSIVPLAI PGLVLGLGYV
FFFSQPTIQI FGLSVTNPFH SLYGTIAVLV LVNIIHFYSV TFVTATTALK KLDREFELVS
QSMGIPFYKT FFRVTVPMCL PAILEMVMYY FVNSMVTVSA VVFLYAADFK LAAVSIVNMD
DAGNVAPAAA MSVLIVVTNI VVRVVYEWGT KALRNRTSQW QKR
|
|---|
| |