| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA0816 |
|---|
| Symbol | |
|---|
| ID | 1165258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 803432 |
|---|
| End bp | 804418 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637331909 |
|---|
| Product | HlyD family secretion protein |
|---|
| Protein accession | NP_699986 |
|---|
| Protein GI | 23500546 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGCA ATACGGTCGG CACTGCCGTG GCAATAGCGT CAACGGCGGT CAACAGCCCG
GAAGCGGGCA ATGTGGCGGT GTTGGCAGTG AAGGATGGTG CCATTGTCAA GGCGGGCGAC
CTTATCGCCC AGCTTGACGA CAAGGCAATC CACGCAAATA TCGTAAAGGA TACGGCTTCC
CTCGCGAAGT CGCAGGCCAC GCTGAACGAT GCGGAAATTC AGCTCAAACG TACGCAGGAT
CTGGTTCGGA AGGGGGTCGC CACGTCGCAG AGTGGCGATG ATGCCCTGGC CGCATTGAAG
GTGGCGCAAG CACAGCTACA GGTCGATCAG GCGCAACTTG CGGCGGATCA GGTGACGCTT
TCCTATACAA AAATCGTGGC GCCCTTTACC GGGCAACTGG GCGTCGTTCA GGTTTCTCCG
GGTGCTTATC TTTCTGCTGG CTCATCGGTT GCTACCCTCA CCCGGATGTC ACCGATCTAT
GCGGAGTTCA CTCTTCCCGA AACGGACCTT GCGCGCATAA GGGCAGCCCT CAAGGACGGC
ACGTTGAAAA CGGATGTGAC GGTGACTTCC GGCGAGGGAA AGGATGTCAC CGAAAGCGGC
TGCGTCGATT TCATCGACAA TGCAGTCGAT CCGGCCAGTG GTACAGTGCG CTTGCGGGCG
ACGCTCGACA ACCGATCCGG CAATTTCTGG CCGGGACAAT CCCTGCGCAT TTCAGTTGAA
TTGGGTAAGA TCGATGATCT GGTGCTGGTT CCCGATGTTG CCGTGGAGCC ACAGGAAAAC
GGTTCCATCA GTTATGTGGT CAAGCCTGAC AATTCCGTCG AAATCAGACC TGTGAGCGTG
GCCTTGCGTG CTGATGGCAT GGCCGGCGTG CGGGCAGGCC TTCAACCGGG CGAAAGAGTG
GTTATCGAAG GGCAGGATGC TCTTTCCAAC GGCAACCGGG TAAAACTGGT CGAGACGAAG
CCAGATGCCA AGGTTTCATC CGACTGA
|
|---|
| Protein sequence | MLRNTVGTAV AIASTAVNSP EAGNVAVLAV KDGAIVKAGD LIAQLDDKAI HANIVKDTAS
LAKSQATLND AEIQLKRTQD LVRKGVATSQ SGDDALAALK VAQAQLQVDQ AQLAADQVTL
SYTKIVAPFT GQLGVVQVSP GAYLSAGSSV ATLTRMSPIY AEFTLPETDL ARIRAALKDG
TLKTDVTVTS GEGKDVTESG CVDFIDNAVD PASGTVRLRA TLDNRSGNFW PGQSLRISVE
LGKIDDLVLV PDVAVEPQEN GSISYVVKPD NSVEIRPVSV ALRADGMAGV RAGLQPGERV
VIEGQDALSN GNRVKLVETK PDAKVSSD
|
|---|
| |