Gene BR0436 details

Gene Information

• Locus tag: BR0436
• Symbol: dxs
• ID: 1166097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: +
• Start bp: 434852
• End bp: 436783
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637329380
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: NP_697464
• Protein GI: 23501337
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGAC CCTCAACACC GCTCCTCGAT AAGGCGCCGA CGCCAGACCG TCTTCGCGCC 
CTGCCGGAGC AGGACCTGCC GCAACTGGCG GAAGAATTGC GCACCGAGCT GATCGACGCG 
GTTTCCACCA CGGGCGGGCA TCTGGGCGCG GGCTTGGGCG TTGTGGAATT GACGGTTGCG 
TTGCATCATG TTTTCAACAC ACCCTATGAT CGCATCATCT GGGATGTCGG CCATCAGGCC 
TATCCGCACA AGATCCTGAC CGGGCGGCGC GACCGCATCC GCACATTGCG CCAGGCGGGC 
GGGCTTTCGG GCTTCACCAA GCGTGCGGAG AGCGAATACG ATCCCTTTGG CGCGGCCCAT 
TCCTCGACCT CCATTTCCGC AGGCCTCGGC ATGGCGGTGG CGAGCGAGCT TTCGGGCGAA 
AAGCGCAATG TGATCGCCGT CATCGGCGAT GGTTCCATGT CAGCGGGCAT GGCCTATGAA 
GCGATGAACA ATGCCGGTGC GCTGGATGCG CGCCTGATCG TTATTCTCAA CGACAATGAT 
ATGTCGATTG CGCCGCCGAC GGGCGCGATG AGTGCCTATC TGGCGCGCCT CGTTTCCGGG 
CGCACCTATC GCAGTGTGCG CGAGGCGGCG AAGCAGGTGG CGCAAAAGCT GCCCAAATTC 
CTTCAGGACA AGGCGCGCAA ATCGGAAGAA TATGCCCGCG CCTTTTTCAC CGGCGGCACG 
CTGTTCGAGG AGCTTGGCTT CTATTATGTC GGCCCGATCG ACGGGCATAA TCTCGACCAC 
CTGCTGCCGG TTCTGAAAAA TGTCCGCGAT ACGCAGAAAG GCCCGGTGCT GATCCATGTC 
GTGACACAGA AGGGTAAGGG CTATGCGCCG GCCGAAGCTG CCGCCGACAA ATATCACGGC 
GTCAACAAGT TCGACGTCAT CACCGGCAAG CAGGCGAAGC CCCCGGCAAA TGTGCCGAGC 
TACACCAAGA TTTTCGGCAC AAGCCTGATT GAGGAAGCGC GCCACGACGA CAAGATCGTC 
GCCGTCACCG CCGCCATGCC GACAGGCACG GGGCTGGACC TTTTTGGCGA GGCTTTCCCG 
AAGCGCGTCT TCGATGTCGG CATTGCCGAG CAGCATGCCG TCACATTCGC TGCCGGTCTT 
GCAAGCGAGG GGTACAAGCC CTTCTGCGCC ATTTATTCCA CCTTTCTCCA GCGCGGCTAC 
GATCAGGTCG TGCACGATGT TTCGATCCAG AACCTGCCCG TGCGCTTCCC CATCGACCGC 
GCCGGGCTGG TGGGCGCGGA TGGCCCCACC CATGCAGGCT CGTTCGATAC GGGCTTTCTT 
GCAGCCCTTC CGGGCTTCGT GGTGATGGCC GCATCTGACG AAGCCGAGCT TCGCCATATG 
GTGCGCACGG CTGCCGAATA TGACGAAGGC CCGATCTCCT TCCGCTATCC GCGCGGTGAT 
GGTGTGGGCG TCGATCTGCC GGAGCGCGGC TCGGTGCTGG AAATCGGCAA GGGCCGCATC 
GTGCGCGAAG GCACCAAGGT GGCGCTTCTT TCCTTCGGTA CACGCTTGCA GGAATGTCTT 
GCAGCCGCTG AAGAACTGGG CGCTGCCGGC CTGTCGACGA CAGTGGCCGA TGCACGTTTC 
GCCAAGCCGC TCGACCATGA CCTGATCCGC CGTCTGGCGC GTGAACATGA AGTGCTGGTG 
ATGGTGGAAG AAGGTGCGGT CGGCGGGTTT GGCAGCCATG TGCTGCAATT CCTCGCCACG 
GACGGGCTTC TGGATCGCGG CCTCAAGGTG CGGGCGCTGA CGCTCCCCGA TATCTATCAG 
GACCATGGCA AGCCGGATGC CATGTATGCC GAAGCGGGCC TTGACCGTAC GGGCATTGTG 
CGCACGGTTT TTGCCGCACT TCATCGCGAT GAACTGGGCC ATGAAGCACT GCCGACACCG 
TTTCGTGCCT GA 

 

Protein sequence

MSRPSTPLLD KAPTPDRLRA LPEQDLPQLA EELRTELIDA VSTTGGHLGA GLGVVELTVA 
LHHVFNTPYD RIIWDVGHQA YPHKILTGRR DRIRTLRQAG GLSGFTKRAE SEYDPFGAAH 
SSTSISAGLG MAVASELSGE KRNVIAVIGD GSMSAGMAYE AMNNAGALDA RLIVILNDND 
MSIAPPTGAM SAYLARLVSG RTYRSVREAA KQVAQKLPKF LQDKARKSEE YARAFFTGGT 
LFEELGFYYV GPIDGHNLDH LLPVLKNVRD TQKGPVLIHV VTQKGKGYAP AEAAADKYHG 
VNKFDVITGK QAKPPANVPS YTKIFGTSLI EEARHDDKIV AVTAAMPTGT GLDLFGEAFP 
KRVFDVGIAE QHAVTFAAGL ASEGYKPFCA IYSTFLQRGY DQVVHDVSIQ NLPVRFPIDR 
AGLVGADGPT HAGSFDTGFL AALPGFVVMA ASDEAELRHM VRTAAEYDEG PISFRYPRGD 
GVGVDLPERG SVLEIGKGRI VREGTKVALL SFGTRLQECL AAAEELGAAG LSTTVADARF 
AKPLDHDLIR RLAREHEVLV MVEEGAVGGF GSHVLQFLAT DGLLDRGLKV RALTLPDIYQ 
DHGKPDAMYA EAGLDRTGIV RTVFAALHRD ELGHEALPTP FRA