| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3389 |
|---|
| Symbol | |
|---|
| ID | 4679296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 3353416 |
|---|
| End bp | 3353928 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639847643 |
|---|
| Product | SET domain-containing protein |
|---|
| Protein accession | YP_994668 |
|---|
| Protein GI | 121599446 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2940] Proteins containing SET domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAC GCAGGATCGT GGTACGCCGC TCGGGCGTTC ACGGCAAGGG CGTATTCGCC
GCGGTACCGA TCAAGGCGGG AGAGCGCGTA GTCGAATACA AGGGCGAGCG GATCTCGTGG
AAAGAGGCGC TGCGCCGCCA TCCGCACGAC CCGGACGATC CGAATCACAC CTTTTACTTC
GCGCTGGAAG AGGGCGGGGT GATCGACGGC AAGATCAACG GCAACAGCGC GCGCTGGATC
AACCATTCGT GCGCGCCGAA CTGCGAAGCC GAGGAAGTGG GCGGGCGCGT GTACATCCAT
GCGCTGCGTG ACATCGACGA GCAGGAAGAA CTGTTCTACG ACTACGGTCT CGTGATCGAC
GCGCGCCTGA CGAAAAAGCT CAAGCGCGAA TACGCGTGCC ATTGCGGCGC GGCGACGTGC
CGCGGCACGC TGCTTGCAAC GTCGGAAGAA GACGAAGGCA AGAAAAAGAA GAAGGCGAAG
AAAGGCGGCA AGGACAAGAA AAAGAAGAAG TGA
|
|---|
| Protein sequence | MSSRRIVVRR SGVHGKGVFA AVPIKAGERV VEYKGERISW KEALRRHPHD PDDPNHTFYF
ALEEGGVIDG KINGNSARWI NHSCAPNCEA EEVGGRVYIH ALRDIDEQEE LFYDYGLVID
ARLTKKLKRE YACHCGAATC RGTLLATSEE DEGKKKKKAK KGGKDKKKKK
|
|---|
| |