Gene BMASAVP1_A2948 details

Gene Information

• Locus tag: BMASAVP1_A2948
• Symbol: fliS
• ID: 4680494
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008785
• Strand: +
• Start bp: 2933469
• End bp: 2933957
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639847206
• Product: flagellar protein FliS
• Protein accession: YP_994242
• Protein GI: 121599180
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGCGCA CGGTGCGATG TATCGATTCG AATGCACCAA AGAGGAGGAA CGCCATGTTT 
ACCCCAGGCC ACGCGGGAGC CAGTGCCTAT GCGCGCGTTG GCGTCGAAAC CGGGGTGATG 
GGCGCGTCTC CCCACCGGCT CATCGCGATG CTGTACCAGG GCGCGCGCCA GGCGATCGCG 
CATGCGCGGC TGCATCTGCA GCAGGGCAAC GTCGCCGCGC GCGGCGAGGC GATCGGCAAG 
GCGATCCGCA TCGTCGAGAG CGGTCTTCAG CAGGCGCTGA ATCTCGAAGT GGGCGGCGAT 
ATCGCTTCGC GCCTCGATTC GCTCTATACC TATATGTGTC GGCGTCTGCT GCAGGCGAAC 
GTCGACGCGA GCGAGCCGAT GCTGATCGAG GTCGACGGCC TGCTCGCGAC GCTCGAGGAT 
GCATGGACGG GCATTGCCCC GGAAGTGGCC AGGATGAACG CCCAGGCGGT GACGGAACAG 
GCTCGATGA 

 

Protein sequence

MPRTVRCIDS NAPKRRNAMF TPGHAGASAY ARVGVETGVM GASPHRLIAM LYQGARQAIA 
HARLHLQQGN VAARGEAIGK AIRIVESGLQ QALNLEVGGD IASRLDSLYT YMCRRLLQAN 
VDASEPMLIE VDGLLATLED AWTGIAPEVA RMNAQAVTEQ AR