Gene BMASAVP1_A2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2219 
SymbolptpA 
ID4681546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2198738 
End bp2199232 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID639846483 
Productlow molecular weight protein-tyrosine-phosphatase 
Protein accessionYP_993531 
Protein GI121598586 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGGCT GCACGATGAA AAGCGTCGCG ATCTGTTTCG TCTGCCTCGG CAATATCTGC 
CGCTCGCCCA CCGCGGAAGG GGTGATGCGC CATCAGGTGG CTGCAGCGGG GCTCGACGGG
GCGATCGAGA TCGATTCGGC CGGCACGGGC GACTGGCATG TCGGCGAAGC GCCCGACGCG
CGCGCGCAGC AAGCGGCGCG TGCGCGGGGC TACGATCTGT CGGCGCTGCG GGCGCGGCAG
ATCGGCGACG CCGATTTCGA ACGCTTCGAT CTCGTGCTCG CGATGGACGG CGCCAATCTT
GCGGCGTTGC GCAAGCGCTG CCCGCCGCAA TATCGGGGCA AGGTCCGGCT CCTGATGGAA
TTCGCGGGCG ACGGCTCGGC CGGCGACATC GCCGATCCAT ATTTCGGCGG CGCGCGCGGC
TTCGAGCAGG TGCTCGATCA GTGCGAGGCC GCGTGCCGCG GCCTTCTCGA CAGCCTGCGT
GAAACGGCGC GCTGA
 
Protein sequence
MSGCTMKSVA ICFVCLGNIC RSPTAEGVMR HQVAAAGLDG AIEIDSAGTG DWHVGEAPDA 
RAQQAARARG YDLSALRARQ IGDADFERFD LVLAMDGANL AALRKRCPPQ YRGKVRLLME
FAGDGSAGDI ADPYFGGARG FEQVLDQCEA ACRGLLDSLR ETAR