Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1654 |
Symbol | |
ID | 4680258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | - |
Start bp | 1647103 |
End bp | 1649544 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639845921 |
Product | fimbrial biogenesis outer membrane usher protein |
Protein accession | YP_992980 |
Protein GI | 121598213 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.148437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCATGC TGGCCGCCGG CAGCCATGCC CGGGCGACGG AGTTCAATGC GTCGTTCCTG AGCATCGACG GCAGGAACGA CGTCGACCTG TCGCAGTTCG CGCAGGCGGA CTACACGCTG CCGGGCACAT ACCTGCTCGA CGTGCAGGTC AACGACGTGT TCTTCGGCCT GCAGCCGATC GAATTCGTCG CGCACGACGA CGGGCAGGGC GCGCGCGCGT GCGTCGCGCC CGAACTCGTC GCGCAGTTCG GGCTGAAGAA GTCGCTCGTC GAGAACCTGC CGCGCACGAT GGGCGGCCGC TGCGCGGATC TCGCGTCGCT CGACGGCGTG ACGATCCGTT ATCAGAAAGG CGAAGGGCGC CTGAAGATCA CGATTGCGCA AGCCGCGCTC GAATTCGCCG ATGCGTCGTA CCTGCCGCCC GAGCGCTGGA GCGACGGCGT CGACGGCGCG ATGCTCGACT ATCGCGTGTT CGCGAACGCG AACCACGCGT TCGGCCGCGG CGCGCAGCAG AACAATGCGG TGCACGCGTA CGGCACGATC GGCGCGAACT GGGGCGCGTG GCGCTTTCGC GGCGATTATC AGGCGCAGAC TCGCGCGGGC GGCGCCGTGT ACGCGGAGCG CGCGTTCCGC TTCAACCAGC TGTACGCGTA TCGCGCGCTG CCGTCGATTC GCTCGACGCT GTCGTTCGGC GAGATCTACG TCGATTCGGA CATCTTCAGC ACGTTCTCGA TGTCGGGCGT CGCGATGAAG AGCGACGACC GGATGCTGCC GCCTTCGATG CGCGGCTACG CGCCGCTCGT CACGGGCGTC GCGCGCACCA ACGCGATTGT CAAGGTGATG CAGGACAGCC GCGTGCTGTA CATGACGAAG GTGTCGCCGG GCGCGTTCGC GCTGTCGAAC CTGAACACGA GCGTGCAGGG CACGCTCGAC GTCGTCGTCG AGGAGGAGGA CGGCACGGTG CAGCGCTTCC AGGTCGCGAC CGCGGCGGTG CCGTTTCTCG CGCGCGAGGG CCAACTGCGC TACAAGACCG CGATCGGCCA GCCGCGCACC TTCGGCGGCG CGGGCATCAC GCCGTGGTTC GGTTTCGCCG AGGCCGCGTA CGGGCTGCCG TTCGACGTGA CCGTCTACGG CGGCCTCATC GCGGCGTCCG GCTATACGTC GGTCGCGTTC GGCGTCGGCC GCGATTTCGG CCGCTTCGGC GCGCTGTCGG CGGACGTGAC GCACGCGCGC GCGACGCTCT GGTGGAACGG GCGGACGAAG CGCGGCAACT CGTATCGAAT CAACTATTCG AAGCACGTCG ACGCGCTCGA CGCCGACGTG CGCTTCTTCG GCTATCGCTT CTCCGAGCGC GACTACACGA ATTTCCAGCA GTTCTCGGGC GACCCGACCG CGTCGGGCCT CGCGAACGGC AAGCAGCGCT ATTCGGCGAT GCTCTCCAAG CGCTTCGGCG ATACGTCGAC CTATTTCTCG TACGACCAGA CGACCTACTG GGCGCGCCCG TCCGATCGGC GCATCGGCGT GACGCTCACG CGCGCGTTCT CGCTCGGCGC GCTGAAGAGC GTGAACCTGG GTTTCTCCGC GTTCCGCACG CAAGGCGCGG GCGGCGGCGG CAACCAGGTG TCGCTGACGG CGACGCTGCC GCTCGGCGAG CGCCAGACGC TCACGTCGAG CGTATCGGCG GGCGAGGGCG GCACGAGCGT GAACGCGGGC TACCTCTACG ACGGCGCGAA CGGGCGCACC TATCAGCTGT ACGGCGGCAC GACCGACGGC CGCGCGTCGG CGAACGCGAG CTTGCGGCAG CGCACGCCGT CGTACCAGCT CACCGCGCAG GCGTCGACGG TCGCGAACGC GTACGCGTCG GCGTCGCTCG AGGTCGACGG CTCGTTCGTC GCGACGCGCT ACGGCGTGAC CGCGCACGCG AACGGCAACG CGGGCGACAC GCGCCTGCTC GTGTCGACCG ACGGCGTGCC CGGCGTGCCG CTGTCCGGCT CGTACGCCCG CACGAATGCG CGCGGCTATG CGGTGATCGA CGGCGTGTCG CCGTACAACG TGTACGACGC GACCGTGAGC GTCGAGAAGC TCGGCCTCGA CACCGACGTG ACGAACCCGA TTCAGCGCAC CGTGCTCACC GACGGCGCGA TCGGCTACAT CCGGTTCAAC GCGGCGCGCG GGCGCAACGT GTTCGTCACG CTGACGGGCG ACGGCGGCGC GCCGGTGCCG TTCGGCGCGT CGGTGCAGGA CGCCGCGACC GGCAAGGAGC TCGGCATCGT CGGCGAGGCG GGCGCCGCGT ACCTGACGCA GGTGCAGCCG CGCGCGAAGC TCGTCGTGCG CGCCGGCGCG AAGACGATCT GCACGCCCGC CGCGCTTCCC GACACGCTGC AGCTCGACGG CACGCCCGCG CCGGTGGCCT GCGAAGCCGC CGCGCAGCAC GCGTCGCGCT GA
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Protein sequence | MFMLAAGSHA RATEFNASFL SIDGRNDVDL SQFAQADYTL PGTYLLDVQV NDVFFGLQPI EFVAHDDGQG ARACVAPELV AQFGLKKSLV ENLPRTMGGR CADLASLDGV TIRYQKGEGR LKITIAQAAL EFADASYLPP ERWSDGVDGA MLDYRVFANA NHAFGRGAQQ NNAVHAYGTI GANWGAWRFR GDYQAQTRAG GAVYAERAFR FNQLYAYRAL PSIRSTLSFG EIYVDSDIFS TFSMSGVAMK SDDRMLPPSM RGYAPLVTGV ARTNAIVKVM QDSRVLYMTK VSPGAFALSN LNTSVQGTLD VVVEEEDGTV QRFQVATAAV PFLAREGQLR YKTAIGQPRT FGGAGITPWF GFAEAAYGLP FDVTVYGGLI AASGYTSVAF GVGRDFGRFG ALSADVTHAR ATLWWNGRTK RGNSYRINYS KHVDALDADV RFFGYRFSER DYTNFQQFSG DPTASGLANG KQRYSAMLSK RFGDTSTYFS YDQTTYWARP SDRRIGVTLT RAFSLGALKS VNLGFSAFRT QGAGGGGNQV SLTATLPLGE RQTLTSSVSA GEGGTSVNAG YLYDGANGRT YQLYGGTTDG RASANASLRQ RTPSYQLTAQ ASTVANAYAS ASLEVDGSFV ATRYGVTAHA NGNAGDTRLL VSTDGVPGVP LSGSYARTNA RGYAVIDGVS PYNVYDATVS VEKLGLDTDV TNPIQRTVLT DGAIGYIRFN AARGRNVFVT LTGDGGAPVP FGASVQDAAT GKELGIVGEA GAAYLTQVQP RAKLVVRAGA KTICTPAALP DTLQLDGTPA PVACEAAAQH ASR
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