Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1451 |
Symbol | |
ID | 4681443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1417926 |
End bp | 1419668 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639845720 |
Product | oxidoreductase family protein |
Protein accession | YP_992781 |
Protein GI | 121598422 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGAGGCG GCCGTCGCGC GGGCGGGCGT CGTCTGCATG ATCGGCTTTC AGCGCCGCTT CGATCCGACC TTCGAGGCGC TCAAGCGCCG CATCGACGCG GGCGAGATCG GCACGCCGGA GATGCTCGTC GTGACGAGCC GCGATCCGGG CGCGCCGCCC GTCGACTACA TCAAGCACTC GGGCGGCATC TTCAAGGACA TGCTGATCCA CGATTTCGAC ATCTTCCGCT GGATCCTCGA CGACGATGCC GACACGCTGC ACGCGACGGG CAGTTGCCTG ACCGACCCGG CGATCGCCGG CGCGGGCGAC ATCGATTCGG CCGCGGTCAC GATCCGCACG AAGCGCGGCC GGCTCTGCCA GATCAACACG TCGCGCCGCG CCGCATACGG CTACGATCAG CGCTTCGAAG TGCTCGGCAG CGCCGGCATG CTGCAGGCGG GCAACGTGCG GCCGACCGAG GTGACGGGCT ACTCGGCGCG CGCGGTGTCG ACGGATCTGC CCGAGGCGTT CTTCCTCGAG CGCTATCGCG CCGCGTACGC GCGCGAGATC GCGCATTTCT TCGCGGCGGT GACGAGCGGC GAGCCGGTGC GCACGACGGT CGCCGACGGC GTGAAGGCGC TCGAGCTCGC CGAGGCGGCG ACGCTGTCGT GGCGCGAGGC CCGCGCGGTG ACGCTCGGCG AGCGGGCGGC CTGAAGGAGC GATGCGATGA TAGTCAGTCA CAGCGCCGCT GCGGTGCGCA TCGGCATCGC GGGGCTCGGC CGGCTCGGCC GGCGCCACGC GGAGAACCTC GCGCGGCGCG TCGCGGGCGC GCGGCTCGCG GCCGCGTGCA GCCCGCTTGC CGACGAGTGC GCGTGGGCGC GCGAGACGCT CGCCGTGCCG CGCGTCTACG AGGATTTCGA CGCGCTCGCG GCCGATCCCG AGCTCGACGC GCTCTGGCTC GTCACGCCGT CGGCGCTGCA CGCGGACCAG ATCGTCGCCG CGTTGCGCGC GGGCAAGCAC GTGTTCTGCG AGAAACCGCT GTCGCTCGAT CTCGGCGAAT GCGAGCGGGT GCTCGCCGAG GCGCGCGCGC GGCCGCATCT CGTCGCGACG ATCGGTTTCA TGCGCCCTTC GATCCGAGCT ATCGCGACGC GTACGCGCGC GTCGCGGCGG GCGAGATCGG CCGGCCGTTC CTCGTGCGCT CGCAGACCTG CGACCGGAAC GATCCCGAGG GCTTTTTCGT GCGCTTCGTG CCGAGCTCGG GCGGCATCTT CCTCGATTGC ACCGTGCACG ACATCGACGT CGCACGATGG CTGCTCGGCG CGCCGCGCGC GACGCGCGTG TACGCGGCGG GCGCGGTCGC GCTGCACGAG GGGCTGCGCG CGTGCGGCGA CGTCGACAAC GGCGTCGCGA TCTGCGAGTT CGAAGGCGGC CGGCTCGCGA TGTTCTATGC GTCGCGCACG ATGGCGCACG GCAACGACAC GCACTCCGAA GTGATCGGCA CGGCGGGCGC GCTCGCGATC GGCCGCAACC CGCGCGCGAA CCGCGTCGAG ATCTATGATG CGGCGGGCAT CCGCAACACC TGCACGCCGA CGTTCTTCGA CCGCTTCGAG GATGCGTTCC TGATCGAGGC GCAGGCGTTC GTCGCGGCGG TGCGCGGCGA GGGCGCCGCC GGCGGCGCGA CGCTCGCGGA CGCGCTCGAG GCGACGAGGA TCGGCCATGC GCTGCGCGAA TCGTTGCAGA CCGGGCGGGC GATCGAGCTG TAG
|
Protein sequence | MRGGRRAGGR RLHDRLSAPL RSDLRGAQAP HRRGRDRHAG DARRDEPRSG RAARRLHQAL GRHLQGHADP RFRHLPLDPR RRCRHAARDG QLPDRPGDRR RGRHRFGRGH DPHEARPALP DQHVAPRRIR LRSALRSARQ RRHAAGGQRA ADRGDGLLGA RGVDGSARGV LPRALSRRVR ARDRAFLRGG DERRAGAHDG RRRREGARAR RGGDAVVARG PRGDARRAGG LKERCDDSQS QRRCGAHRHR GARPARPAPR GEPRAARRGR AARGRVQPAC RRVRVGARDA RRAARLRGFR RARGRSRARR ALARHAVGAA RGPDRRRVAR GQARVLRETA VARSRRMRAG ARRGARAAAS RRDDRFHAPF DPSYRDAYAR VAAGEIGRPF LVRSQTCDRN DPEGFFVRFV PSSGGIFLDC TVHDIDVARW LLGAPRATRV YAAGAVALHE GLRACGDVDN GVAICEFEGG RLAMFYASRT MAHGNDTHSE VIGTAGALAI GRNPRANRVE IYDAAGIRNT CTPTFFDRFE DAFLIEAQAF VAAVRGEGAA GGATLADALE ATRIGHALRE SLQTGRAIEL
|
| |