| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1341 |
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| Symbol | |
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| ID | 4678661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 1317208 |
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| End bp | 1320618 |
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| Gene Length | 3411 bp |
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| Protein Length | 1136 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639845612 |
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| Product | alpha amylase family protein |
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| Protein accession | YP_992673 |
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| Protein GI | 121600751 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCC GTCCGTCTTT CGCGCCGAAC CTTTACTTCT GCGATGCCCG TCTCGTCGGG
CCATTGCATG CGTGGCCGCC GCTGTTCGAG CGCGTCGCCG CATGGGGCTT CGATCATGTG
CTGATCGGCG GCCTCTGGGC GGCGAGCCGC CGCGGCTATC CGCGCCACGT CGCGGACCCC
GATCGCCCCG CCGAATCGTT CGCGACGTCG CTCGACGCGA CGAGCGCGCT CGCCCGCCTG
TCGGACAGCG CGCGCGAGCA CGGGCTGCGC ATCGCCGTCG AAGTCGTCGT CGACCGCGTC
GCGCGCGAGC ACCCGCTGCA CGACGCACAC CGCGACTGGT ACGTCGTCGA CGAACGCGAC
GACGCGCTGA TCGATCCGCG CACCGCGGCG CTCGCGCACG ACGTCGCGCA TGCGAACGTC
GGCAGCGCGG CCGCGCTCGA CGCGCTCGCC GACTGGTGGC GCGCCCGGCT CGGCGCGCTG
GCCGACGCGG GCGCGGCGGC CTTTCTCGTC GACGCGCCGC AGCGGATGCC GGCGCACTGG
TGGGCCGCGC TGCTCCGCGC GCTGCGGCAG GCCCGCGCGG ATCTGCCGGT GATCGCCGGC
GTGCCGGGCC GGGAGCGCGA GGCGCTCGCG CAGCTCGCCT GCGCCGGCTT CGACGCGGCG
TTCTCATCGC TGCGCTGGTG GGACCTGCGC GCGCCGTGGT TCGTCGAAGA ACACCGGCTG
CTGCGGCGCG TCGGCGCGCC GATCGCGTTC CCGGACGCGT TCGACGGCCC GCGGCTCGCG
CACGATTGGC GGCAGGCCGC GCCCGAGACG ATCGAGCGCG CGCATCGCCG CGCGCTGTGG
ACCGCCGCCG CGCTCGGCAC TGGCTGGCTC GTGCCGATGG GCTTCGAGCG CGGCGTGGCC
GTCGAACTGA TGGCGCGCGA GCCGCGAGCC GACGCGTACC GCGCCGCGCT CGACAGCGCG
CCGTTCGACT TGTCGGGCGC GATCGCCGAA GCGAACGCGC TGCGCCGCGC GGCGCCCGCG
CTGCGCGGCA ACGGCGAGAT CGCGCAGCTG ACGGGCGCCG ATGCGCCGGC GACCGTGCTG
CTGCGCGGCG CGCGCACCGC GCTCGAATAC GACGACGAGG CTGCGCTGAT CGCGGTCAAT
CCGGACCTCG CGCACCCCGC GGCGATCGCG CCGTGCGCGG CGCTCGCCGG CGTGCCGGGC
GGCTTCACGC GCTTCGCGCC GTTCGCCGAC GGCCGCCGCC CGCGTATGGG CGCGCTCGAA
CCGTTCGCGC TCGCCGCCGG TGCCTGCACG TTGCTGCGCG CGCAGCGCGC GCGCCCGGTC
ACGACGGCCC CCGCCGAGGA TCGGCGCGGC AATCGGCCCG GCACCCGTGC GTCGGTCACG
GCCGCGCTCG CCGGCGAGCG CATCGCGATC GAGCGCATCG AGCCCGTCGT CGACGATGGC
CGCTTCGCCG TCAAGCGCGT GATCGGCGAG CGGCTCGCCG TGCGCGCGGC GATTTTCGCC
GACGGTCACG CACGCCTCGC GGCGGCCGTC CAATGGCGCG CCGCGGACGA GAACGGCTGG
CACGAGGCCC GATGCGCCGC CGAAGGCAAC GATGCGTGGC GAGCGGACAT TCCGCTCGAA
CGGCTCGGCC GGCATCTGTT CCGCGTGATC GCGTGGCGCG ACGATTGGGC GACGCTCGTC
GACGAGATCG GCAAGAAGCA CGCGGCGGGT CAGGCGGTGG CGCTCGAGTT GGAAGAAGCG
CGGCGGCTCG CCGCCGACGT GCTCGCGCGC GCGCCGGAGG CGAACCCCGC CGCGCTCGCC
GTGCTGCGCG AATTCGCGGC GGCCCTCGAC GCCGCGCCGC CCGACCAGCG GCTCGCGCTG
ATCGGCGCGC CGCACGTCGC CGACGCGTTC GCGGCGCTGC GCGAGCGAGC GTTCGCCACG
CGCGACGCGC CCGTCTTCCC GGTCGACGTC GAGCGGCGCG CGGCCCGCTT CGCCAGCTGG
TACGAGATGT TTCCCCGCTC GGCGAGCGAC GATGTCCGCC GCCACGGCAC GTTCGACGAC
GTCGTCGCGC ATCTGCCGCG CATCCGCGAC ATGGGCTTCG ACGTGCTGTA CTTCCCGCCG
ATCCATCCGA TCGGCACGAC CGCGCGCAAG GGCCGCAACA ACAGCCTGCA GGCCGCGCCC
GACGACGTCG GCAGTCCGTA TGCGATCGGC TCGCCGGCGG GCGGCCACAC CGCCGTCCAT
CCGCAGCTCG GCTCGCTCGA TGCGTTCCGC CAGCTCGTCG CTGCGGCGCG CGCGCACGAT
CTCGAGATCG CGCTCGACTT CGCGGTTCAA TGCTCGCCGG ACCATCCGTG GCTCACCGAG
CATCCCGGCT GGTTCGCGTG GCGGCCGGAC GGCTCGCTGC GCTACGCGGA AAATCCGCCG
AAGCGCTATC AGGACATCGT GAATCCCGAC TTCTACGCGC GCGACGCGAT GCCCGCGCTG
TGGATCGCGC TGCGCGACGT CGTGCTGTTC TGGATCGACG CGGGCGTGCG CATCTTCCGC
GTCGACAATC CGCACACGAA GCCGCTGCCG TTCTGGGCAT GGATGATCGC CGACGTGCGC
GCGCGACACC CGGACACGGT GTTCCTGTCC GAGGCGTTCA CGCGGCCGAG CATGATGTAC
CGGCTCGCGA AGCTCGGCTT CTCGCAGTCG TACACCTACT TCACGTGGCG CGAGTCGAAG
CGCGAGTTCA TCGATTATCT GACCGAGCTC GCCGACGGGC CGGCGCGCGA ATACTTCCGG
CCGAACTTCT TCGTCAACAC GCCGGACATC AATCCGCGCC ACCTGCAGCA GGCGCCGCGC
ACGCAGTTCG TGATCCGCGC GGCGCTCGCC GCGACGCTCT CGGGCCTCTG GGGAATGTAT
TCGGGCTTCG AGCTGTGCGA GTCCGACGCG CTGCCCGACA GCGAGGAATA TCGCGACGCG
GAGAAATACG AGCTGCGCGC GCGCGACTGG CGGCGGCCCG GCCACATCGG CGACGAAATC
GCGCGGCTCA ACCGCGCGCG GCGCGACAAC CCGGCGCTGC AGACGCATCT CGGCATCCGC
TTCGCGCACG CGCCGAACGA CGCGGTGCTG GTGTTCTCGA AGGCGACGCC CGCGCACGAC
AACGTCGTCG TCGTCGCGAT CAGCCTCGAT CCGTGGCATC CGCAGGCCAC CGATTTCACG
CTCGACGCAG CGCTGTACCG CGGCTGGGGC ATCGCCGACG GCGAGCGGCT CGTCGCCGTC
GATCAGACGG CCGACCACGT CGAAACCTGG CACGGGCGCC GGCATTACGT CGCGCTCGAC
CCGCACGTGC GCCCGTTCGC GATCTGGCGC GTCGCGCCCG CGGCGGGCGT CGCGCGCGGC
GCGCGCGACG ACGCGCGCGA CGTCCCCGCA CAGGAGGTGC ACGAACGATG A
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| Protein sequence | METRPSFAPN LYFCDARLVG PLHAWPPLFE RVAAWGFDHV LIGGLWAASR RGYPRHVADP
DRPAESFATS LDATSALARL SDSAREHGLR IAVEVVVDRV AREHPLHDAH RDWYVVDERD
DALIDPRTAA LAHDVAHANV GSAAALDALA DWWRARLGAL ADAGAAAFLV DAPQRMPAHW
WAALLRALRQ ARADLPVIAG VPGREREALA QLACAGFDAA FSSLRWWDLR APWFVEEHRL
LRRVGAPIAF PDAFDGPRLA HDWRQAAPET IERAHRRALW TAAALGTGWL VPMGFERGVA
VELMAREPRA DAYRAALDSA PFDLSGAIAE ANALRRAAPA LRGNGEIAQL TGADAPATVL
LRGARTALEY DDEAALIAVN PDLAHPAAIA PCAALAGVPG GFTRFAPFAD GRRPRMGALE
PFALAAGACT LLRAQRARPV TTAPAEDRRG NRPGTRASVT AALAGERIAI ERIEPVVDDG
RFAVKRVIGE RLAVRAAIFA DGHARLAAAV QWRAADENGW HEARCAAEGN DAWRADIPLE
RLGRHLFRVI AWRDDWATLV DEIGKKHAAG QAVALELEEA RRLAADVLAR APEANPAALA
VLREFAAALD AAPPDQRLAL IGAPHVADAF AALRERAFAT RDAPVFPVDV ERRAARFASW
YEMFPRSASD DVRRHGTFDD VVAHLPRIRD MGFDVLYFPP IHPIGTTARK GRNNSLQAAP
DDVGSPYAIG SPAGGHTAVH PQLGSLDAFR QLVAAARAHD LEIALDFAVQ CSPDHPWLTE
HPGWFAWRPD GSLRYAENPP KRYQDIVNPD FYARDAMPAL WIALRDVVLF WIDAGVRIFR
VDNPHTKPLP FWAWMIADVR ARHPDTVFLS EAFTRPSMMY RLAKLGFSQS YTYFTWRESK
REFIDYLTEL ADGPAREYFR PNFFVNTPDI NPRHLQQAPR TQFVIRAALA ATLSGLWGMY
SGFELCESDA LPDSEEYRDA EKYELRARDW RRPGHIGDEI ARLNRARRDN PALQTHLGIR
FAHAPNDAVL VFSKATPAHD NVVVVAISLD PWHPQATDFT LDAALYRGWG IADGERLVAV
DQTADHVETW HGRRHYVALD PHVRPFAIWR VAPAAGVARG ARDDARDVPA QEVHER
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