| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A0806 |
|---|
| Symbol | |
|---|
| ID | 4681644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 813233 |
|---|
| End bp | 814804 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639845080 |
|---|
| Product | metabolite:proton symporter family protein |
|---|
| Protein accession | YP_992150 |
|---|
| Protein GI | 121598409 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.413485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCGGTG CGCCTACCCG GCGCGCCGCG CAACGCATCG ATCACGCGGC CGCGCGATGC
GCGGCCGGCT CGCGGGCAAG CGACGGCCCG CAGGGGCGCC GCGTGCGCCT TCGCACCGCC
GCGCGCGAAC CGCCGGCATG CGTCACGTGC CGCGTCCACC CGACTCTCGA TTCGAACAAA
GGCGCAACGG CCGTCGAGCG CGCGCGACAA GCGACGCGCG CTCGAGCGGA CGCCGTGCCG
CCACAACCGG AGCCCCGCAT GTCGGACACC CGTCTTTCCG CTTCCGCCGC CGCGCCGCGC
GCCGCGAACA CGACGAACCA CCGTCGCATC GTGTTCGCGA GCTTCATCGG CACGGCGATC
GAGTTCTACG ATTTCTACGT GTACGCGACA GCCGCCGCGC TCGTGATCGG CCCCGTGTTC
TTCCCGCACG GCTCGGCCAC CGCGCAGGCG CTGTCCGCGT TCGTCACGTT CGGCATCGCG
TTCATCGCGC GGCCGATCGG CTCGTTCCTG TTCGGCCACT TCGGCGACCG GATCGGCCGC
AAGTCGACGC TCGTCGCGTC ACTGCTCGTG ATGGGCGTGT CGACGACCGC GATCGGCTTC
GTGCCCGGCT ACGACGCGAT CGGCGCGCTC GCGCCCGTGC TGCTCTGCGT GCTGCGGTTC
GGCCAGGGCA TCGGCCTCGG CGGCGAATGG GGCGGCGCCG CGCTCCTCGC CACCGAGCAC
GCGCCCGCCG GCAAGCGCGG CTGGTTCGGG ATGTTTCCGC AGCTCGGCCC GTCGATCGGC
TTTCTCGCGT CGAACGGCCT GTTCTTCGCG CTTGCGCTCA CGCTGTCCGA CGAGCAGTTT
CGTTCGTGGG GCTGGCGCAT CCCGTTTCTC GTGAGCGCGG CGCTCGTCGC GGTCGGCCTC
TACGTACGCC TGAAGATCGC CGAAACGCCC GCGTTCCAGG CCGCGCTCGA CCGACACGAG
CGCGTGCGCG TACCGCTCGC GGCGCTCGTT GCGCACCACT GGCGGCCGAC GCTGCTCGGC
GCGCTCGCGA TGGTCGTCTG CTATACGCTG TTCTATATCT CGACGGTGTT CTCGCTGTCG
TACGGCGTCT CGACGCTGCA TTTCTCGCGC CAGAGCTTCC TCGGCCTGCT GTGTTTCGCG
GTGCTGTTCA TGGCGCTCGC GACGCCGCTC GCCGCCGCGG CCGCCGATCG CTTCGGTCGC
AAGCCGGTGC TGATCGCGGG CGCGATCGCC GCGCTGCTGT CCGGCTTCAC GATGGCGCCG
CTGCTCGGCA GCGGCTCGAT GCCGCTCGTC GCGCTGTTCC TGACGATCGA GCTGTTCCTG
ATGGGCGTGA CGTTCGCGCC GATGGGCGCG CTGCTGCCGG AACTGTTCCC GGCCAACGTG
CGCTACACGG GCGCGGGGGT CGCGTACAAC CTGGGCGGCA TCCTGGGCGC GTCGATCGCG
CCTTACATCG CGCAGTTGCT TGCCCCGCGC GGCGGACTTG CGTGGGTCGG CGCCTACGTG
TCGGCCGCGG CGGCGATCAG CCTCGTCGGC GTGCTGCTGA TGCGCGAAAC GCGCGATGCG
AAGCTGACAT AA
|
|---|
| Protein sequence | MRGAPTRRAA QRIDHAAARC AAGSRASDGP QGRRVRLRTA AREPPACVTC RVHPTLDSNK
GATAVERARQ ATRARADAVP PQPEPRMSDT RLSASAAAPR AANTTNHRRI VFASFIGTAI
EFYDFYVYAT AAALVIGPVF FPHGSATAQA LSAFVTFGIA FIARPIGSFL FGHFGDRIGR
KSTLVASLLV MGVSTTAIGF VPGYDAIGAL APVLLCVLRF GQGIGLGGEW GGAALLATEH
APAGKRGWFG MFPQLGPSIG FLASNGLFFA LALTLSDEQF RSWGWRIPFL VSAALVAVGL
YVRLKIAETP AFQAALDRHE RVRVPLAALV AHHWRPTLLG ALAMVVCYTL FYISTVFSLS
YGVSTLHFSR QSFLGLLCFA VLFMALATPL AAAAADRFGR KPVLIAGAIA ALLSGFTMAP
LLGSGSMPLV ALFLTIELFL MGVTFAPMGA LLPELFPANV RYTGAGVAYN LGGILGASIA
PYIAQLLAPR GGLAWVGAYV SAAAAISLVG VLLMRETRDA KLT
|
|---|
| |