Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_1404 |
Symbol | dehII-1 |
ID | 4677720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008784 |
Strand | + |
Start bp | 1386955 |
End bp | 1387995 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639843920 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_991000 |
Protein GI | 121597351 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGTGT GCTTGCGTGC CCGTGCGCTC GTGCGCGATG AAGCCGGCCT CTATTTCTCG CCGGGCATGC AGGCAGGCGG TTCGCCGATA ATGTCGGACG GCAGAGGTGC GTTTCTTTCG GACGTGCAGG CGCGGCGGTC CGCGCGTGGC GGATCGTACG GGGCGGTCCT GCGTTCGTCG CCCAGGCGCG CGCCGCCGGC CGGCGCGCGG CTCGCCGCGG CGTTCGGCCG GGCGCGCGCG TTCGGCGTCG GGCCGGTGCG AGCCGCCGAC GGCGGCCGCT GCATCCTGAA ACGTCATCCC ACGACTCAGG AGAACATCAT GCAGACGCTT GGCGTGAAGG CATTGGTATT CGACGTGTTC GGCACCGTGG TCGACTGGCG TTCCGGCGTC ATTCGCGACG CGACGCCGTT CCTCGCGAAG TACGGCGGCG CGGGAGCCGA TCCGGCCGCG TTCGCGGATG CATGGCGCGC GGGCTATTCG CCCGCGATGG AGGAGGTGCG CAGCGGCCGC CGGCCGTTCA CGCGGCTCGA CGTGCTGCAC CGGGAGAATC TCGACGCGCT GCTGCCCGCG TTCGGCATCG ATCGCGCGAG CGTGGCCGAC GCCGATCTCG ACGCGCTGAA CCTCGCATGG CACCGGCTCG ATCCGTGGCC CGATTCGGTC GCGGGGCTCA CGCGGCTGAA GGCGCATTAC ATCATCGCGC CGCTGTCGAA CGGCAACGTG ATCCTGATGA TCGACATGGC CAAGCGCGCG GGGCTGCCGT GGGACGCGAT CCTCGGCGCC GAGGTGGCGC AGGCGTACAA GCCGACGCCC GAAGCGTACC TGCGCACGGC CGATATCCTC GCGCTGCGTC CGGATGAGGT GTGCCTCGTC GCCGCGCACA ACGGCGACCT CGCGGCCGCG CGGCGCTGCG GCTATCGCAC CGCGTTCGTC GCGCGAGCGC GCGAGCATGG TCCCGCGCAG ACCACCGATC TGCGCGCGGA GCAGGATTGG GACGTCGTCG CGGCCGATTT CATCGAGCTC GCGCAGCGCT TCGGCGCGTG A
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Protein sequence | MPVCLRARAL VRDEAGLYFS PGMQAGGSPI MSDGRGAFLS DVQARRSARG GSYGAVLRSS PRRAPPAGAR LAAAFGRARA FGVGPVRAAD GGRCILKRHP TTQENIMQTL GVKALVFDVF GTVVDWRSGV IRDATPFLAK YGGAGADPAA FADAWRAGYS PAMEEVRSGR RPFTRLDVLH RENLDALLPA FGIDRASVAD ADLDALNLAW HRLDPWPDSV AGLTRLKAHY IIAPLSNGNV ILMIDMAKRA GLPWDAILGA EVAQAYKPTP EAYLRTADIL ALRPDEVCLV AAHNGDLAAA RRCGYRTAFV ARAREHGPAQ TTDLRAEQDW DVVAADFIEL AQRFGA
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