Gene BMASAVP1_1297 details

Gene Information

• Locus tag: BMASAVP1_1297
• Symbol: atpA-2
• ID: 4678427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 1289165
• End bp: 1291177
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639843814
• Product: F0F1 ATP synthase subunit alpha
• Protein accession: YP_990894
• Protein GI: 121596459
• COG category: [C] Energy production and conversion
• COG ID: [COG0056] F0F1-type ATP synthase, alpha subunit
• TIGRFAM ID: [TIGR00962] proton translocating ATP synthase, F1 alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.166055
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCCGA CGCCTGACGC ACCCGCCGCC GCCGATGCCG CAACCGGCGC CGGCTGGCTC 
GCGCGCCGCC GGGGCGCACT CGCGCGCGTC GCGCTCGCGC CCATCGCGCA GGCGATCGGG 
CGGGTCGAGC GCGTCGCGGA CGGGATCGCG TTCGTGTCCG GTCTCGAAGA CACGATGCTC 
AACGAAGTGC TGCGTTTCGA AGGCGGCGTG ACCGGCTTCG CGCATACGCT CGACGAGGAT 
CTGATCAGCG TCGTGCTGCT CGATCCGGAC GCGGGCGTTC GCGCGCAGAC GGCGGTCGCG 
CGCACGGGCG CGGTGCTCGA AGTGCCGGCC GGGCCGCAAC TGCTCGGGCG CGTGGTCGAT 
CCGCTCGGCC GCCCGCTCGA CGGCGGCGCA CCGCTCGATG CGGCGCACAC GCTGCCGATC 
GAGCGCGCCG CGCCGGCGAT CATCGAGCGC GATCTCGTCA GCGAGCCGCT CGACACCGGC 
GTGCTGATCG TCGACGCGCT CTTCACGATC GGGCGCGGCC AGCGCGAGCT GATCATCGGC 
GATCGCGCGA CCGGCAAGAC CTCGCTCGCG ATCGACGCGA TCGTCAACCA GCGGCATTCG 
GACGTGATCT GCGTGTACGT CGCGATCGGC CAGCGCGCGA GCGCGGTGCG CCGCGTGATC 
GACGCGGTGC GCCGCTACGG CGCGCCCGAG CGCTGCGTCT TCGTCGTCGC GCCGGCCGCG 
TGCGCGCCGG GGCTGCAGTG GATCGCGCCG TTCGCGGGCT TCTCGATCGC CGAATATTTC 
CGCGACCGCG GCCAACACGC GCTCGTCGTC GTCGATGACC TGACAAAGCA TGCGGCGACG 
CACCGCGAGC TCGCGCTGCT CACGCGCGAG CCGCCCGGCC GCGAGGCGTA TCCGGGCGAC 
ATCTTCTACG TGCACGCGCG CCTGCTCGAA CGCGCGGCGA AGCTGTCGGC GGCGCTCGGC 
GGCGGATCGC TGTCCGCGCT GCCGATCGCG GAGACCGATG CGGGCAACCT CGCCGCCTAC 
ATTCCGACGA ACCTGATTTC GATCACCGAC GGGCAGATCG TGCTCGATTC GGCGCTGTTC 
GCCGCGAACC AGCGGCCGGC CGTCGACGTC GGGCTGAGCG TGAGCCGCGT CGGCGGCAAG 
GCGCAGCATC CGGCGCTGCG CGCCGCGTCG GGCCGCCTGC GGCTCGACTA TGCGCAGTTC 
CTCGAGCTGG AGGCGTTCAC GCGCTTCGGC GGGCTCACGG ACGCGCGGCT GCGCGCGCAG 
ATCACGCGCG GCGAGCGCAT TCGCGCGTTG ATCACGCAGC CGCGCTTTCG CGCGCTGCGC 
ACGCTCGACG AAGTGGTGCT GCTCAAGGCG CTCGCGGCGG GCACGCTCGA TGCGATGTCG 
CCGGATCTCG TCGCGCCGCT GCGCGAGCGC TTGCCTGCGT GGCTCGATGC GCGGATCGCG 
GCGCTCACGC CGGCGCTTGC GCCGCCGCGC GACTGGCTTG CGGACGATGC GGCGCTCGAC 
GCGCTCGCGG AATCGGTCGG CGAGCTGATC GAGCGGATCG CCGCGGACGC CGCGCGTCGC 
GCGACGGCGG GCATGCCGGC GGAGGACGCG GCGGGCGACA TCGGCGGCGC GTTCGGCGGC 
GAGCAGGCGC GCGGCGATGC GGATCGTGAT GCGGATCATG GCGCGAATCG CGAGGTCAGT 
CGCGAGGTCA GTCCCGAGGC GAGTCGCGAA GTGAGCCGTG AAGTGAGCCG TGAAGTGAGC 
CACGAGGCCG ATCGAGACGC GGCCGCCGAT GCGGCGCGCG TCGCCGGTCG GGCGCCCGGG 
CGCGCCGAGC CGGATCGCGC GGTCCCACGC GCGATGCCCG ACGGGCCGCC GCGCGCGCAG 
GCCGACGGCG ATCGCGCATC GGCGTCTCGG CCGCCGCCCG ATGCGCGCGG CGACGCGGCG 
CGCACCGCAC CGTCTCCGCA AGGCGGCGCC GACGCCAACG TCAATGCCGA TGCCAACGTC 
GATGCCGAAG CCGAAGCGAG GCACAAGCGA TGA 

 

Protein sequence

MTPTPDAPAA ADAATGAGWL ARRRGALARV ALAPIAQAIG RVERVADGIA FVSGLEDTML 
NEVLRFEGGV TGFAHTLDED LISVVLLDPD AGVRAQTAVA RTGAVLEVPA GPQLLGRVVD 
PLGRPLDGGA PLDAAHTLPI ERAAPAIIER DLVSEPLDTG VLIVDALFTI GRGQRELIIG 
DRATGKTSLA IDAIVNQRHS DVICVYVAIG QRASAVRRVI DAVRRYGAPE RCVFVVAPAA 
CAPGLQWIAP FAGFSIAEYF RDRGQHALVV VDDLTKHAAT HRELALLTRE PPGREAYPGD 
IFYVHARLLE RAAKLSAALG GGSLSALPIA ETDAGNLAAY IPTNLISITD GQIVLDSALF 
AANQRPAVDV GLSVSRVGGK AQHPALRAAS GRLRLDYAQF LELEAFTRFG GLTDARLRAQ 
ITRGERIRAL ITQPRFRALR TLDEVVLLKA LAAGTLDAMS PDLVAPLRER LPAWLDARIA 
ALTPALAPPR DWLADDAALD ALAESVGELI ERIAADAARR ATAGMPAEDA AGDIGGAFGG 
EQARGDADRD ADHGANREVS REVSPEASRE VSREVSREVS HEADRDAAAD AARVAGRAPG 
RAEPDRAVPR AMPDGPPRAQ ADGDRASASR PPPDARGDAA RTAPSPQGGA DANVNADANV 
DAEAEARHKR