Gene BMASAVP1_1291 details

Gene Information

• Locus tag: BMASAVP1_1291
• Symbol: atpC-2
• ID: 4678054
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 1286228
• End bp: 1286683
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 639843808
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_990888
• Protein GI: 121598127
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria); [TIGR03166] alternate F1F0 ATPase, F1 subunit epsilon

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.50661
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGCTG AGCTGCGCGT GACGATCGCG ACGCCGGCGC GCGTGTGCGT CGACGATCTG 
CCGATCGTGT CGCTGCGCGC CGAGGACGCG AGCGGCGCGT TCGGCATCCG CGCGGGCCAC 
GTCGATTTCG TCACGCTGCT GCGCGCGTCA GTCGTGCGCT GGCGCACCGC CGACGGCGCG 
ACGCATTACG CGGCGCTTGA CGGCGGCGTG CTGCGCGTGA CGCGCGGCGC GCGCATCGAG 
ATCGCGTGCC GCGACGCGGT GCTGGGCGAG TCGCTCGCCG AGCTCGAGGC GGTGGTGCGC 
GGCGTGCGCG CGACGCAGCT CGACGAGAAG CGCCGCGCGC GCGTCGACGA GACGCGGCTG 
CATGCGCAGG CGGTGCGGCG GCTGCTCACG TATCTGCGGC CCGAGCACGC GAAGGACGGC 
GTGCACGCGC CGCTGAAGCC GGAGACGCTC GAATGA 

 

Protein sequence

MGAELRVTIA TPARVCVDDL PIVSLRAEDA SGAFGIRAGH VDFVTLLRAS VVRWRTADGA 
THYAALDGGV LRVTRGARIE IACRDAVLGE SLAELEAVVR GVRATQLDEK RRARVDETRL 
HAQAVRRLLT YLRPEHAKDG VHAPLKPETL E